Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA endoreduplication

Term: GO:0042023  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene78679 SustainPine v3.0 252
AutoFact: cell cycle switch protein CCS52A [Pisum sativum] 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat cell cycle regulatory protein 2.61e-08
Internal
sp_v3.0_unigene79157 SustainPine v3.0 379
AutoFact: CMGC/CDK/CDC2 protein kinase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PBQ1_COPC7 0.0
FL-Next: tr=Cdc2Pa protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: CDKC 1.904e-15
Internal
sp_v3.0_unigene79216 SustainPine v3.0 257
AutoFact: cyclin dependent kinase (cdc2b) [Chenopodium rubrum] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division control protein 2 2.947e-12
Internal
sp_v3.0_unigene94070 SustainPine v3.0 1242
AutoFact: Cyclin-dependent kinase G-2 n=4 Tax=Oryza sativa RepID=CDKG2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin dependent kinase 2.834e-13
C-terminus
sp_v3.0_unigene94241 SustainPine v3.0 428
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 4.0e-24
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene94668 SustainPine v3.0 585
AutoFact: Cyclin-dependent kinase B1-1 n=2 Tax=Oryza sativa RepID=CKB11_ORYSJ 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase B1-1 1.665e-11
C-terminus
sp_v3.0_unigene96012 SustainPine v3.0 398
AutoFact: Putative cell cycle switch protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat cell cycle regulatory protein 9.713e-08
Internal
sp_v3.0_unigene99033 SustainPine v3.0 402
AutoFact: putative cyclin-dependent protein kinase [Arabidopsis thaliana] gb|AAO64868.1| At5g50860 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDKC 1.379e-15
Internal
sp_v3.0_unigene102870 SustainPine v3.0 743
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105052 SustainPine v3.0 551
AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 1.99993e-41
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene106010 SustainPine v3.0 512
AutoFact: Cyclin-dependent kinase n=1 Tax=Helianthus tuberosus RepID=Q8GVD7_HELTU 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase 3.448e-14
Putative N-terminus
sp_v3.0_unigene106543 SustainPine v3.0 489
AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9S1Y4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle, putative 1.111e-09
Internal
sp_v3.0_unigene106821 SustainPine v3.0 404
AutoFact: E3 ubiquitin-protein ligase UPL3 [Arabidopsis thaliana] gb|AEE86953.1| E3 ubiquitin-protein ligase UPL3 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene108067 SustainPine v3.0 404
AutoFact: cyclin-dependent kinase B1-2 [Nicotiana tabacum] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin dependent kinase 2.108e-13
Internal
sp_v3.0_unigene108314 SustainPine v3.0 557
AutoFact: cyclin-dependent kinase B [Scutellaria baicalensis] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase 4.558e-14
N-terminus
sp_v3.0_unigene108454 SustainPine v3.0 153
AutoFact: Cyclin-A1-4 n=1 Tax=Oryza sativa Japonica Group RepID=CCA14_ORYSJ 2.0e-12
FL-Next: sp=Cyclin-A1-4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: CycA2 1.58e-14
Internal
sp_v3.0_unigene112903 SustainPine v3.0 456
AutoFact: cyclin A [Scutellaria baicalensis] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin 1.329e-29
Internal
sp_v3.0_unigene116540 SustainPine v3.0 486
AutoFact: CMGC/CDK/CDK5 protein kinase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N260_COPC7 0.0
FL-Next: tr=Cdc2Pa protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: CDKB2 7.336e-11
N-terminus
sp_v3.0_unigene126884 SustainPine v3.0 546
AutoFact: HECT domain-containing protein-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZFW5_PICSI 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative HECT ubiquitin-protein ligase 3 1.165e-08
Putative C-terminus
sp_v3.0_unigene137312 SustainPine v3.0 302
AutoFact: E3 ubiquitin-protein ligase UPL3 [Arabidopsis thaliana] gb|AEE86953.1| E3 ubiquitin-protein ligase UPL3 [Arabidopsis thaliana] 9.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain