Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lateral root primordium development

Term: GO:0010386  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1568 SustainPine v3.0 3619
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene1780 SustainPine v3.0 1518
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pattern formation protein, putative 3.113e-08
Complete
sp_v3.0_unigene1853 SustainPine v3.0 3743
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 1.966e-16
C-terminus
sp_v3.0_unigene6191 SustainPine v3.0 3544
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.58596e-41
Complete
sp_v3.0_unigene6436 SustainPine v3.0 2136
AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 0.0
FL-Next: sp=Anthranilate synthase component I-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Anthranilate synthase alpha subunit 1.422e-15
C-terminus
sp_v3.0_unigene6901 SustainPine v3.0 3756
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 8.507e-28
Complete
sp_v3.0_unigene7843 SustainPine v3.0 3324
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.39801e-41
Putative C-terminus
sp_v3.0_unigene11430 SustainPine v3.0 828
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 5.0e-21
FL-Next: Isoform 2 of Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 0.0
Sma3: Auxin response factor 2 1.716e-07
Internal
sp_v3.0_unigene12324 SustainPine v3.0 4347
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene15133 SustainPine v3.0 1598
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 2.693e-08
Internal
sp_v3.0_unigene23988 SustainPine v3.0 2896
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene34436 SustainPine v3.0 496
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 5.237e-08
Internal
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene39069 SustainPine v3.0 261
AutoFact: Unassigned protein
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 3.921e-08
Internal
sp_v3.0_unigene41217 SustainPine v3.0 3576
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene41612 SustainPine v3.0 156
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9SVJ6_RICCO 6.0e-19
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 5.294e-12
Internal
sp_v3.0_unigene48432 SustainPine v3.0 427
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 2.0e-26
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48606 SustainPine v3.0 125
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 1.0e-11
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 1.818e-08
Internal
sp_v3.0_unigene48975 SustainPine v3.0 300
AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative guanine nucleotide-exchange protein GEP2 1.006e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain