Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: phototropism

Term: GO:0009638  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99474 SustainPine v3.0 949
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 1.189e-17
Putative C-terminus
sp_v3.0_unigene99766 SustainPine v3.0 638
• AutoFact: Auxin response factor n=1 Tax=Physcomitrella patens RepID=D2NUD7_9BRYO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 5.513e-38
Internal
sp_v3.0_unigene99896 SustainPine v3.0 704
• AutoFact: auxin response factor 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 4.91099e-41
Internal
sp_v3.0_unigene101258 SustainPine v3.0 557
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome 2.305e-15
Internal
sp_v3.0_unigene101481 SustainPine v3.0 535
• AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 1.0e-29
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 1.011e-22
Putative N-terminus
sp_v3.0_unigene104253 SustainPine v3.0 615
• AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] gb|AAG52282.1|AC019018_19 putative non-phototropic hypocotyl; 25081-26618 [Arabidopsis thaliana] gb|AAO00852.1| putative non-phototropic hypocotyl [Arabidopsis thaliana] gb|AAP49519.1| At1g52 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Root phototropism protein, putative 6.805e-07
Internal
sp_v3.0_unigene104874 SustainPine v3.0 571
• AutoFact: auxin response factor 6a [Oryza sativa] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 3.448e-25
Putative N-terminus
sp_v3.0_unigene105304 SustainPine v3.0 328
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 8.0e-30
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 5.084e-17
Putative N-terminus
sp_v3.0_unigene106151 SustainPine v3.0 307
• AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 4.2039e-45
Internal
sp_v3.0_unigene106280 SustainPine v3.0 570
• AutoFact: Auxin response factor 1 n=1 Tax=Cucumis sativus RepID=Q6L8U3_CUCSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 5.509e-20
Internal
sp_v3.0_unigene107322 SustainPine v3.0 365
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 1.626e-19
Internal
sp_v3.0_unigene107497 SustainPine v3.0 357
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.80199e-40
Internal
sp_v3.0_unigene112854 SustainPine v3.0 293
• AutoFact: Protein kinase PINOID n=3 Tax=Brassicaceae RepID=O64682_ARATH 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 1.291e-33
Internal
sp_v3.0_unigene114268 SustainPine v3.0 492
• AutoFact: non-phototropic hypocotyl 3 [Arabidopsis thaliana] 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene117765 SustainPine v3.0 189
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 1.0e-27
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 0.0
Internal
sp_v3.0_unigene121918 SustainPine v3.0 520
• AutoFact: NPH3 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, Mutator sub-class, expressed 6.035e-13
Internal
sp_v3.0_unigene124056 SustainPine v3.0 386
• AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome C 3.739e-24
Internal
sp_v3.0_unigene124133 SustainPine v3.0 97
• AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 1.039e-14
Internal
sp_v3.0_unigene125530 SustainPine v3.0 116
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 7.0e-15
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome D 9.551e-25
Internal
sp_v3.0_unigene125700 SustainPine v3.0 379
• AutoFact: phototropin 2 [Arabidopsis thaliana] gb|AED97003.1| phototropin 2 [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 5.394e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain