Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CUL4 RING ubiquitin ligase complex

Term: GO:0080008  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene52869 SustainPine v3.0 322
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene54253 SustainPine v3.0 463
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 0.0
• FL-Next: sp=DNA damage-binding protein 1; cheesmanii). 0.0
Internal
sp_v3.0_unigene60730 SustainPine v3.0 401
• AutoFact: Unassigned protein
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61289 SustainPine v3.0 199
• AutoFact: WD-repeat protein 33 n=3 Tax=Andropogoneae RepID=B6SPQ9_MAIZE 2.0e-20
• FL-Next: sp=Flowering time control protein FY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61653 SustainPine v3.0 256
• AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 8.0e-34
• FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: PP1/PP2A phosphatases pleiotropic regulator PRL1 4.233e-09
Putative C-terminus
sp_v3.0_unigene70080 SustainPine v3.0 356
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 3 delta subunit 6.663e-09
Putative N-terminus
sp_v3.0_unigene75989 SustainPine v3.0 204
• AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.142e-09
N-terminus
sp_v3.0_unigene76639 SustainPine v3.0 294
• AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 2.0e-29
• FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: PP1/PP2A phosphatases pleiotropic regulator PRL1 5.308e-09
Putative C-terminus
sp_v3.0_unigene78449 SustainPine v3.0 401
• AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rae1-like protein 5.379e-09
Internal
sp_v3.0_unigene79564 SustainPine v3.0 330
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene94189 SustainPine v3.0 368
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene96257 SustainPine v3.0 1014
• AutoFact: cullin 3-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 8.198e-18
C-terminus
sp_v3.0_unigene100584 SustainPine v3.0 165
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126569 SustainPine v3.0 1318
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene127580 SustainPine v3.0 1083
• AutoFact: Putative vernalization independence (Fragment) n=5 Tax=Picea abies RepID=Q1EJS0_PICAB 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene127950 SustainPine v3.0 815
• AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene129477 SustainPine v3.0 585
• AutoFact: Putative cullin [Oryza sativa] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 5.815e-12
C-terminus
sp_v3.0_unigene130085 SustainPine v3.0 405
• AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene132849 SustainPine v3.0 499
• AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative WD-40 repeat protein 8.405e-08
Internal
sp_v3.0_unigene140323 SustainPine v3.0 381
• AutoFact: UV-damaged DNA binding factor - like protein [Arabidopsis thaliana] 1.0e-14
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain