Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: root hair cell differentiation

Term: GO:0048765  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene114539 SustainPine v3.0 237
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 1.0e-29
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 3.113e-08
Internal
sp_v3.0_unigene126217 SustainPine v3.0 698
AutoFact: Auxin transporter-like protein 1 n=1 Tax=Medicago truncatula RepID=LAX1_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 1.213e-29
Internal
sp_v3.0_unigene128726 SustainPine v3.0 667
AutoFact: GEM-like protein 5 [Arabidopsis thaliana] sp|Q9LYV6.1|GEML5_ARATH RecName: Full=GEM-like protein 5 emb|CAB86627.1| ABA-responsive protein-like [Arabidopsis thaliana] gb|AAR20771.1| At5g13200 [Arabidopsis thaliana] gb|AAS92344.1| At5g13200 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FIP1 1.501e-21
Putative C-terminus
sp_v3.0_unigene128888 SustainPine v3.0 431
AutoFact: DNA binding / transcription factor [Arabidopsis thaliana] gb|AAO92055.1| hypothetical protein [Arabidopsis thaliana] gb|AAS09990.1| MYB transcription factor [Arabidopsis thaliana] gb|AAT69172.1| hypothetical protein At2g30420 [Arabidopsis thaliana] gb|ADC 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Triptychon and cpc, putative 1.283e-11
N-terminus
sp_v3.0_unigene129262 SustainPine v3.0 534
AutoFact: auxin transporter-like protein 1 [Arabidopsis thaliana] gb|AED90316.1| auxin transporter-like protein 1 [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 1.667e-25
C-terminus
sp_v3.0_unigene130756 SustainPine v3.0 314
AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 9.0e-34
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 3.168e-08
Internal
sp_v3.0_unigene131076 SustainPine v3.0 202
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 1.0e-16
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene133063 SustainPine v3.0 343
AutoFact: COBRA-like protein 8 [Arabidopsis thaliana] sp|Q9LIB6.1|COBL8_ARATH RecName: Full=COBRA-like protein 8; Flags: Precursor dbj|BAB03074.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75877.1| COBRA-like protein 8 [Arabidopsis thaliana] 1.0e-27
FL-Next: sp=COBRA-like protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein COBRA, putative 1.093e-11
Internal
sp_v3.0_unigene135755 SustainPine v3.0 451
AutoFact: putative glycerophosphoryl diester phosphodiesterase family protein [Nicotiana tabacum] dbj|BAF34116.1| glycerophosphodiesterase-like protein [Nicotiana tabacum] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycerophosphoryl diester phosphodiesterase, putative 1.908e-07
Putative C-terminus
sp_v3.0_unigene136248 SustainPine v3.0 134
AutoFact: Protein SEUSS-like 4 n=5 Tax=Arabidopsis RepID=Q9FGT9_ARATH 9.0e-07
FL-Next: sp=Probable glycerophosphoryl diester phosphodiesterase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137618 SustainPine v3.0 199
AutoFact: putative pattern formation protein EMB30 [Arabidopsis thaliana] 3.0e-12
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pattern formation protein, putative 2.693e-08
Internal
sp_v3.0_unigene163349 SustainPine v3.0 336
AutoFact: universal stress protein (USP) family protein [Arabidopsis thaliana] emb|CAC01734.1| putative protein [Arabidopsis thaliana] gb|AED92420.1| universal stress protein (USP) family protein [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative uncharacterized protein At2g03720 8.285e-06
C-terminus
sp_v3.0_unigene185136 SustainPine v3.0 360
AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative guanine nucleotide-exchange protein GEP2 1.119e-11
Internal
sp_v3.0_unigene203677 SustainPine v3.0 447
AutoFact: GRAM domain containing protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 2.585e-36
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain