Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: thylakoid lumen

Term: GO:0031977  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1443 SustainPine v3.0 3458
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 7, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Cell division protein ftsH, putative 1.876e-14
Complete
sp_v3.0_unigene2167 SustainPine v3.0 1931
AutoFact: Probable plastid-lipid-associated protein 3, chloroplastic n=2 Tax=Oryza sativa Japonica Group RepID=PAP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fibrillin 8.043e-12
Complete
sp_v3.0_unigene2683 SustainPine v3.0 2843
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene3294 SustainPine v3.0 3226
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.995e-13
Complete
sp_v3.0_unigene3964 SustainPine v3.0 2411
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.848e-13
C-terminus
sp_v3.0_unigene4038 SustainPine v3.0 3403
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cell division protein ftsH, putative 1.894e-14
Complete
sp_v3.0_unigene4198 SustainPine v3.0 1005
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene4308 SustainPine v3.0 437
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene4336 SustainPine v3.0 468
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene4896 SustainPine v3.0 878
AutoFact: Peptidase S41 family protein [Arabidopsis thaliana] gb|AAL11596.1|AF424602_1 AT4g17740/dl4905c [Arabidopsis thaliana] emb|CAB10554.1| PSII D1 protein processing enzyme [Arabidopsis thaliana] emb|CAB78777.1| PSII D1 protein processing enzyme [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II D1 protease 5.889e-13
Putative N-terminus
sp_v3.0_unigene6429 SustainPine v3.0 1543
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 0.0
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene6459 SustainPine v3.0 1046
AutoFact: violaxanthin de-epoxidase [Zingiber officinale] 0.0
FL-Next: sp=Violaxanthin de-epoxidase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Violaxanthin de-epoxidase 1.4013e-45
C-terminus
sp_v3.0_unigene6665 SustainPine v3.0 1407
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene7179 SustainPine v3.0 1526
AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 8.455e-08
C-terminus
sp_v3.0_unigene8468 SustainPine v3.0 1103
AutoFact: putative zinc dependent protease [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.981e-13
Internal
sp_v3.0_unigene9332 SustainPine v3.0 671
AutoFact: Os08g0382400 protein n=3 Tax=Oryza sativa RepID=Q6YW78_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase chloroplast 5.379e-09
C-terminus
sp_v3.0_unigene10042 SustainPine v3.0 1170
AutoFact: FKBP-type peptidyl-prolyl cis-trans isomerase 6 [Arabidopsis thaliana] sp|Q0WRJ7.1|FKBP6_ARATH RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase 6, chloroplastic; AltName: Full=FKBP20-2; AltName: Full=PPIase; AltName: Full=Rotamase; Flags: Precu 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 1.528e-06
Complete
sp_v3.0_unigene11050 SustainPine v3.0 388
AutoFact: D1 protease precursor [Nicotiana plumbaginifolia] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: D1 protease 2.643e-09
C-terminus
sp_v3.0_unigene12677 SustainPine v3.0 866
AutoFact: Cell division protein FtsH-like protein n=3 Tax=Arabidopsis RepID=Q8LBL6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 3.064e-13
Internal
sp_v3.0_unigene12694 SustainPine v3.0 638
AutoFact: putative oxygen evolving complex protein [Oryza sativa Japonica Group] gb|AAM93731.1| putative oxygen evolving complex protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 3.506e-09
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain