Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid lumen

Term: GO:0031977  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene125229 SustainPine v3.0 375
• AutoFact: putative cell division control protein [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 2.473e-10
Internal
sp_v3.0_unigene126726 SustainPine v3.0 1168
• AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v3.0_unigene126858 SustainPine v3.0 1416
• AutoFact: Chloroplast oxygen-evolving protein (Fragment) n=1 Tax=Arachis diogoi RepID=E3NYU3_9FABA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE3 5.166e-25
Putative Complete
sp_v3.0_unigene127301 SustainPine v3.0 647
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene127327 SustainPine v3.0 1193
• AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127330 SustainPine v3.0 1359
• AutoFact: FK506 binding-like protein n=5 Tax=Picea sitchensis RepID=A9P2H9_PICSI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rotamase 1.178e-16
Complete
sp_v3.0_unigene127397 SustainPine v3.0 1308
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127474 SustainPine v3.0 616
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene127850 SustainPine v3.0 829
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene127961 SustainPine v3.0 614
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene128017 SustainPine v3.0 690
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Misassembled
sp_v3.0_unigene128088 SustainPine v3.0 1093
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative N-terminus
sp_v3.0_unigene128440 SustainPine v3.0 341
• AutoFact: [E] COG0346 Lactoylglutathione lyase and related lyases 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lactoylglutathione lyase, putative 1.825e-10
Internal
sp_v3.0_unigene132174 SustainPine v3.0 441
• AutoFact: Carboxyl-terminal-processing protease, putative n=1 Tax=Ricinus communis RepID=B9S174_RICCO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: D1 protease-like protein 9.576e-10
Internal
sp_v3.0_unigene132428 SustainPine v3.0 334
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 2.0e-34
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene135916 SustainPine v3.0 474
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=B8LMQ9_PICSI 1.99993e-41
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene137778 SustainPine v3.0 212
• AutoFact: FtsH extracellular protease [Arabidopsis thaliana] gb|AAB63626.1| cell division protein isolog [Arabidopsis thaliana] emb|CAB43894.1| cell division protein-like [Arabidopsis thaliana] emb|CAB81312.1| cell division protein-like [Arabidopsis thaliana] gb|AE 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protein ftsH, putative 1.801e-14
Internal
sp_v3.0_unigene139072 SustainPine v3.0 379
• AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 9.593e-11
Internal
sp_v3.0_unigene140415 SustainPine v3.0 1319
• AutoFact: Plastid lipid-associated protein 2, chloroplastic n=1 Tax=Brassica rapa RepID=PAP2_BRACM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillin 8.231e-12
Complete
sp_v3.0_unigene140718 SustainPine v3.0 698
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain