Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid lumen

Term: GO:0031977  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene31582 SustainPine v3.0 423
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8MA36_BLAHO 2.0e-38
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene31590 SustainPine v3.0 493
AutoFact: Peptidyl-prolyl cis-trans isomerase n=3 Tax=Giardia intestinalis RepID=A8BC67_GIAIC 8.0e-27
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene31683 SustainPine v3.0 574
AutoFact: Peptidyl-prolyl cis-trans isomerase slr1251 n=1 Tax=Synechocystis sp. PCC 6803 RepID=PPI2_SYNY3 3.0e-39
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene31886 SustainPine v3.0 379
AutoFact: Cyclophilin A protein-like protein (Fragment) n=1 Tax=Artemia franciscana RepID=C7DZD0_ARTSF 8.0e-25
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene31924 SustainPine v3.0 611
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Pleurotus ostreatus RepID=Q96TV2_PLEOS 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene32178 SustainPine v3.0 389
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Candida RepID=PPIA_CANAL 6.99949e-42
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene32450 SustainPine v3.0 1146
AutoFact: Thylakoid lumenal 29.8 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJN0_RICCO 0.0
FL-Next: sp=PsbP domain-containing protein 6, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene33335 SustainPine v3.0 590
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Polysphondylium pallidum RepID=D3BQE6_POLPA 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene35779 SustainPine v3.0 752
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phlebotomus papatasi RepID=A8C9X3_PHLPP 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Ostreococcus lucimarinus (strain CCE9901). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene37289 SustainPine v3.0 3845
AutoFact: PREDICTED: similar to cell division protein FtsH-like n=1 Tax=Vitis vinifera RepID=UPI0001983FB9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 2.673e-11
Complete
sp_v3.0_unigene37843 SustainPine v3.0 899
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.816e-13
C-terminus
sp_v3.0_unigene50940 SustainPine v3.0 239
AutoFact: [O] COG0464 ATPases of the AAA+ class 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 1.609e-10
Internal
sp_v3.0_unigene51411 SustainPine v3.0 605
AutoFact: Oxygen-evolving enhancer protein 3-1, chloroplastic n=3 Tax=Arabidopsis RepID=PSBQ1_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE3 3.453e-25
C-terminus
sp_v3.0_unigene51412 SustainPine v3.0 622
AutoFact: Oxygen-evolving enhancer protein 3-2 n=1 Tax=Brassica rapa RepID=A8CF48_BRACM 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE3 3.453e-25
C-terminus
sp_v3.0_unigene51417 SustainPine v3.0 599
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 2.0e-39
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene51418 SustainPine v3.0 608
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 8.0e-31
FL-Next: sp=PsbP domain-containing protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene51425 SustainPine v3.0 135
AutoFact: Photosynthetic oxygen-evolving protein 16 kDa subunit n=2 Tax=Salicornia RepID=B0L6Y3_9CARY 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEC 16 kDa subunit 4.04e-08
Internal
sp_v3.0_unigene51681 SustainPine v3.0 501
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene57033 SustainPine v3.0 307
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Oryza sativa Japonica Group RepID=Q53P96_ORYSJ 1.0e-19
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative N-terminus
sp_v3.0_unigene57495 SustainPine v3.0 413
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 2.0e-31
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain