Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid lumen

Term: GO:0031977  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16680 SustainPine v3.0 598
AutoFact: Cell division protease ftsH, putative n=1 Tax=Ricinus communis RepID=B9SIY9_RICCO 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane AAA-metalloprotease 5.882e-09
Internal
sp_v3.0_unigene16801 SustainPine v3.0 903
AutoFact: PAP_fibrillin domain containing protein 2.0e-06
FL-Next: Isoform 3 of Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 0.0
N-terminus
sp_v3.0_unigene16889 SustainPine v3.0 851
AutoFact: putative protease HhoA precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 7.227e-08
Internal
sp_v3.0_unigene16983 SustainPine v3.0 1429
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16993 SustainPine v3.0 994
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17020 SustainPine v3.0 1089
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene18965 SustainPine v3.0 581
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Pleurotus ostreatus RepID=Q96TV2_PLEOS 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene20714 SustainPine v3.0 1007
AutoFact: Plastocyanin, chloroplastic n=1 Tax=Spinacia oleracea RepID=PLAS_SPIOL 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastocyanin 0.0
Complete
sp_v3.0_unigene20871 SustainPine v3.0 538
AutoFact: glyoxalase I [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lactoylglutathione lyase, putative 2.329e-10
Putative C-terminus
sp_v3.0_unigene22234 SustainPine v3.0 994
AutoFact: protease Do-like 1 [Arabidopsis thaliana] sp|O22609.2|DEGP1_ARATH RecName: Full=Protease Do-like 1, chloroplastic; Flags: Precursor dbj|BAB02539.1| DegP protease precursor [Arabidopsis thaliana] gb|AAK62640.1| K16N12.18/K16N12.18 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 5.355e-12
C-terminus
sp_v3.0_unigene23632 SustainPine v3.0 482
AutoFact: FK506-binding protein 2 n=1 Tax=Yarrowia lipolytica CLIB122 RepID=FKBP2_YARLI 3.0e-34
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 1.385e-18
Putative Complete
sp_v3.0_unigene23667 SustainPine v3.0 1663
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.899e-13
Putative C-terminus
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene27861 SustainPine v3.0 920
AutoFact: FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis thaliana] sp|Q9SCY2.2|FKBP3_ARATH RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic; Short=PPIase; AltName: Full=AtFKBP13; AltName: Full=FK506-binding protein 1; AltNa 5.60519e-45
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FKBP-type peptidyl-prolyl cis-trans isomerase 8.065e-13
Complete
sp_v3.0_unigene28022 SustainPine v3.0 517
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 5.0e-17
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Thylakoid lumenal 17.9 kDa protein, chloroplastic 9.747e-06
Putative N-terminus
sp_v3.0_unigene30787 SustainPine v3.0 618
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monosiga brevicollis RepID=A9UYA2_MONBE 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene30885 SustainPine v3.0 1231
AutoFact: immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] dbj|BAD30608.1| immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] gb|EAZ02679.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 1.71e-06
Complete
sp_v3.0_unigene31269 SustainPine v3.0 560
AutoFact: 20 kDa cyclophilin precursor [Toxoplasma gondii] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene31368 SustainPine v3.0 665
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8M4H8_BLAHO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene31560 SustainPine v3.0 538
AutoFact: PREDICTED: peptidyl-prolyl cis-trans isomerase H-like n=1 Tax=Pongo abelii RepID=UPI0001D5D432 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain