Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small-subunit processome

Term: GO:0032040  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1364 SustainPine v3.0 3881
AutoFact: U3 small nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9S245_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene2027 SustainPine v3.0 3915
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3561 SustainPine v3.0 1818
AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene8281 SustainPine v3.0 2280
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene11672 SustainPine v3.0 1551
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U3 snoRNA-associated protein 11 1.501e-09
Complete
sp_v3.0_unigene12850 SustainPine v3.0 1857
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15756 SustainPine v3.0 928
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene18066 SustainPine v3.0 1946
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene23725 SustainPine v3.0 470
AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Os03g0343300 protein 4.386e-06
Internal
sp_v3.0_unigene27664 SustainPine v3.0 830
AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 6.0e-20
FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene28702 SustainPine v3.0 275
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 1.259e-09
Internal
sp_v3.0_unigene31450 SustainPine v3.0 926
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 1.529e-06
C-terminus
sp_v3.0_unigene35662 SustainPine v3.0 1099
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U3 snoRNA-associated protein 11 1.39e-09
Complete
sp_v3.0_unigene38869 SustainPine v3.0 1569
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U3 snoRNA-associated protein 11 1.501e-09
Complete
sp_v3.0_unigene41177 SustainPine v3.0 161
AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43502 SustainPine v3.0 156
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 5.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene46299 SustainPine v3.0 570
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T842_RICCO 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene51692 SustainPine v3.0 1354
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U3 snoRNA-associated protein 11 1.39e-09
Complete
sp_v3.0_unigene52506 SustainPine v3.0 372
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-27
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene56082 SustainPine v3.0 446
AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain