Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126998 SustainPine v3.0 535
AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9GSC5_POPTR 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene127238 SustainPine v3.0 1183
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 6.524e-07
N-terminus
sp_v3.0_unigene128228 SustainPine v3.0 608
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAC63661.2| putative cinnamoyl CoA reductase [Arabidopsis thaliana] gb|ABK32183.1| At2g23910 [Arabidopsis thaliana] gb|AEC07501.1| Rossmann-fold NAD(P)-binding domain-contain 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene128842 SustainPine v3.0 1116
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene129083 SustainPine v3.0 432
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RXM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 2.38221e-44
Putative C-terminus
sp_v3.0_unigene129403 SustainPine v3.0 325
AutoFact: putative MATE efflux family protein [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 4.90454e-44
Internal
sp_v3.0_unigene130044 SustainPine v3.0 470
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene130070 SustainPine v3.0 406
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene130695 SustainPine v3.0 855
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene131669 SustainPine v3.0 340
AutoFact: Detoxifying efflux carrier 35 n=5 Tax=Arabidopsis RepID=F4JTB2_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 1.162e-27
C-terminus
sp_v3.0_unigene135528 SustainPine v3.0 243
AutoFact: Lysine/histidine transporter n=2 Tax=Populus trichocarpa RepID=B9HJ04_POPTR 5.0e-19
FL-Next: sp=Lysine histidine transporter-like 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Lysine/histidine transporter 3.015e-23
Putative C-terminus
sp_v3.0_unigene139941 SustainPine v3.0 417
AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 1.506e-06
Internal
sp_v3.0_unigene141327 SustainPine v3.0 347
AutoFact: Cinnamoyl-CoA reductase-like protein n=4 Tax=Brassicaceae RepID=Q8LEH3_ARATH 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene148177 SustainPine v3.0 472
AutoFact: polygalacturonase precursor [Glycine max] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 8.13e-11
C-terminus
sp_v3.0_unigene155874 SustainPine v3.0 126
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RFE3_RICCO 5.0e-13
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene158461 SustainPine v3.0 292
AutoFact: polygalacturonase PG1-like [Oryza sativa Japonica Group] dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group] 7.0e-35
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Sma3: Polygalacturonase 8.815e-16
Internal
sp_v3.0_unigene162964 SustainPine v3.0 397
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene165125 SustainPine v3.0 233
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165193 SustainPine v3.0 185
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 8.0e-20
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene167557 SustainPine v3.0 275
AutoFact: root hair specific 2 [Arabidopsis thaliana] gb|AAF78500.1|AC012187_20 Strong similarity to an unknown protein orf4 gi|1402878 from Arabidopsis thaliana 81kb genomic sequence gb|X98130 and is a member of an uncharacterized membrane protein PF|01554 family. 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 1.725e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain