Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene95141 SustainPine v3.0 438
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] emb|CAA66809.1| hypothetical protein [Arabidopsis thaliana] dbj|BAB01841.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15295.1| AT3g26590/MFE16_11 [Arabidopsis thaliana] gb|AAN73299.1| 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 4.84e-33
Internal
sp_v3.0_unigene95206 SustainPine v3.0 709
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AEE81864.1| mate efflux domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 3.65403e-41
C-terminus
sp_v3.0_unigene96843 SustainPine v3.0 551
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal
sp_v3.0_unigene99124 SustainPine v3.0 280
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 2.361e-35
Internal
sp_v3.0_unigene99644 SustainPine v3.0 675
AutoFact: early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG23449.1|AC084165_15 hypothetical protein [Arabidopsis thaliana] dbj|BAF01245.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31435.1| early-responsive to dehydration s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene99708 SustainPine v3.0 1113
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene99806 SustainPine v3.0 553
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene100116 SustainPine v3.0 628
AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 9.80909e-45
C-terminus
sp_v3.0_unigene101421 SustainPine v3.0 1343
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene101584 SustainPine v3.0 760
AutoFact: Transparent testa 12 protein n=1 Tax=Zea mays RepID=B6SV36_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene102522 SustainPine v3.0 585
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9T6V3_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 4.19689e-42
C-terminus
sp_v3.0_unigene103776 SustainPine v3.0 395
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene104626 SustainPine v3.0 418
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RZX1_RICCO 8.0e-25
FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Putative N-terminus
sp_v3.0_unigene105331 SustainPine v3.0 294
AutoFact: U3 small nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9S245_RICCO 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene111138 SustainPine v3.0 442
AutoFact: Polygalacturonase n=2 Tax=Cucumis RepID=E5GBI5_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 1.99e-26
Internal
sp_v3.0_unigene111596 SustainPine v3.0 406
AutoFact: SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana] gb|AEE74369.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene118629 SustainPine v3.0 325
AutoFact: Sucrose transporter n=1 Tax=Vitis vinifera RepID=Q8W534_VITVI 2.0e-32
FL-Next: sp=Sucrose transport protein; Spinacia oleracea (Spinach). 0.0
Sma3: Sucrose transporter 0.0
N-terminus
sp_v3.0_unigene124982 SustainPine v3.0 301
AutoFact: 80 kD MCM3-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RSV1_RICCO 6.02558e-44
FL-Next: tr=80 kD MCM3-associated protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene126600 SustainPine v3.0 1347
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Putative C-terminus
sp_v3.0_unigene126804 SustainPine v3.0 954
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain