Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32230 SustainPine v3.0 1029
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene34261 SustainPine v3.0 731
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene34734 SustainPine v3.0 439
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] emb|CAA66809.1| hypothetical protein [Arabidopsis thaliana] dbj|BAB01841.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15295.1| AT3g26590/MFE16_11 [Arabidopsis thaliana] gb|AAN73299.1| 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 1.811e-26
N-terminus
sp_v3.0_unigene36769 SustainPine v3.0 1110
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene37824 SustainPine v3.0 1811
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene39227 SustainPine v3.0 372
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 2.80499e-40
Internal
sp_v3.0_unigene40489 SustainPine v3.0 881
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene40650 SustainPine v3.0 900
• AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 0.0
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene41636 SustainPine v3.0 2995
• AutoFact: DUF221 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene41981 SustainPine v3.0 253
• AutoFact: Sucrose transport protein n=1 Tax=Spinacia oleracea RepID=SUT_SPIOL 6.0e-27
• FL-Next: sp=Sucrose transport protein; Spinacia oleracea (Spinach). 0.0
• Sma3: Sucrose transporter 0.0
Internal
sp_v3.0_unigene42771 SustainPine v3.0 414
• AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene43473 SustainPine v3.0 249
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43838 SustainPine v3.0 864
• AutoFact: Polygalacturonase n=1 Tax=Solanum lycopersicum RepID=Q9M7D3_SOLLC 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene44128 SustainPine v3.0 1256
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene45550 SustainPine v3.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene50214 SustainPine v3.0 840
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene51690 SustainPine v3.0 487
• AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene51739 SustainPine v3.0 166
• AutoFact: early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG23449.1|AC084165_15 hypothetical protein [Arabidopsis thaliana] dbj|BAF01245.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31435.1| early-responsive to dehydration s 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene53662 SustainPine v3.0 233
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9T6V4_RICCO 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 2.081e-19
Internal
sp_v3.0_unigene53692 SustainPine v3.0 428
• AutoFact: MatE domain containing protein 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 1.374e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain