Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: red or far-red light signaling pathway

Term: GO:0010017  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11276 SustainPine v3.0 1426
AutoFact: COP9 signalosome complex subunit 7 [Arabidopsis thaliana] sp|Q94JU3.1|CSN7_ARATH RecName: Full=COP9 signalosome complex subunit 7; Short=CSN complex subunit 7; AltName: Full=Protein FUSCA 5 gb|AAK50074.1|AF372934_1 At1g02090/T7I23_24 [Arabidopsis thaliana 0.0
FL-Next: sp=COP9 signalosome complex subunit 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: COP9 signalosome complex subunit 7 6.225e-18
Complete
sp_v3.0_unigene13621 SustainPine v3.0 2662
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13897 SustainPine v3.0 1302
AutoFact: Light-mediated development protein DET1, putative n=1 Tax=Ricinus communis RepID=B9S080_RICCO 0.0
FL-Next: sp=Light-mediated development protein DET1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Light-mediated development protein DET1 4.319e-14
C-terminus
sp_v3.0_unigene16781 SustainPine v3.0 1121
AutoFact: Phosphate transporter PHO1-3 n=2 Tax=Oryza sativa RepID=PHO13_ORYSJ 0.0
FL-Next: sp=Phosphate transporter PHO1-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: PHO1-like protein 1.105e-38
C-terminus
sp_v3.0_unigene22044 SustainPine v3.0 566
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=NDK_CYAP4 0.0
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene22201 SustainPine v3.0 367
AutoFact: Two-component response regulator ARR17 n=2 Tax=Arabidopsis RepID=ARR17_ARATH 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 3.277e-39
Internal
sp_v3.0_unigene22933 SustainPine v3.0 686
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND55_PHYIT 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23054 SustainPine v3.0 618
AutoFact: Nucleoside diphosphate kinase n=4 Tax=Daphnia pulex RepID=E9FZ29_DAPPU 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23198 SustainPine v3.0 859
AutoFact: Pho1-like protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HSH0_POPTR 0.0
FL-Next: sp=Phosphate transporter PHO1-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: PHO1-like protein 3.54e-34
C-terminus
sp_v3.0_unigene23445 SustainPine v3.0 522
AutoFact: Ubiquitin-conjugating enzyme E2-16 kDa n=48 Tax=Fungi/Metazoa group RepID=UBC1_MAGO7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene23650 SustainPine v3.0 511
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23662 SustainPine v3.0 524
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene24226 SustainPine v3.0 652
AutoFact: MYB transcription factor n=3 Tax=Oryza sativa RepID=Q0D3F9_ORYSJ 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.535e-30
N-terminus
sp_v3.0_unigene24612 SustainPine v3.0 350
AutoFact: SOUL heme-binding-like protein n=3 Tax=Arabidopsis RepID=F4IRX7_ARATH 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At2g37970 protein 4.386e-06
N-terminus
sp_v3.0_unigene27176 SustainPine v3.0 503
AutoFact: Proteasome component region PCI domain-containing protein n=2 Tax=Dictyosteliida RepID=F4PVL4_9MYCE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 9.576e-09
C-terminus
sp_v3.0_unigene28090 SustainPine v3.0 722
AutoFact: Nucleoside diphosphate kinase B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WEZ2_9STRA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene28903 SustainPine v3.0 2814
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Timing of CAB expression 1 6.363e-09
Complete
sp_v3.0_unigene29552 SustainPine v3.0 1194
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9I6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene31026 SustainPine v3.0 563
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=NDK_ACAM1 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene31261 SustainPine v3.0 865
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Polysphondylium pallidum RepID=D3BL27_POLPA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain