Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleomorph

Term: GO:0033009  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127517 SustainPine v3.0 996
AutoFact: Heat shock protein 70 n=3 Tax=Embryophyta RepID=C9WCK6_9MARC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 6.50623e-42
Internal
sp_v3.0_unigene127530 SustainPine v3.0 1333
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.282e-14
Putative Complete
sp_v3.0_unigene127837 SustainPine v3.0 1369
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.167e-13
Putative Complete
sp_v3.0_unigene128753 SustainPine v3.0 494
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 9.0e-31
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene129238 SustainPine v3.0 419
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 6.35e-10
C-terminus
sp_v3.0_unigene129469 SustainPine v3.0 341
AutoFact: heat-shock protein Hsp70 [Eunicella cavolinii] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene132470 SustainPine v3.0 391
AutoFact: putative luminal binding protein [Corylus avellana] 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 1.33894e-41
Internal
sp_v3.0_unigene133173 SustainPine v3.0 679
AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin alpha-2 chain 1.525e-09
Putative Complete
sp_v3.0_unigene135749 SustainPine v3.0 470
AutoFact: Histone H3 n=1 Tax=Oikopleura dioica RepID=E4WRZ1_OIKDI 6.0e-22
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene137386 SustainPine v3.0 210
AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 2.0e-15
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Alpha tubulin 5.684e-09
N-terminus
sp_v3.0_unigene137867 SustainPine v3.0 258
AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Heterosigma akashiwo RepID=Q5G8Z8_9STRA 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 9.055e-39
Internal
sp_v3.0_unigene137949 SustainPine v3.0 228
AutoFact: cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 4.499e-36
Internal
sp_v3.0_unigene140361 SustainPine v3.0 1253
AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 9.915e-40
Misassembled
sp_v3.0_unigene142247 SustainPine v3.0 1063
AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene142280 SustainPine v3.0 1170
AutoFact: tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|NP_197479.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|XP_002871906.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] ref|XP_002873963.1| tubulin alpha-3 [Arabidopsis lyrata subsp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.884e-33
Putative Complete
sp_v3.0_unigene143144 SustainPine v3.0 1019
AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.242e-28
N-terminus
sp_v3.0_unigene143737 SustainPine v3.0 594
AutoFact: alpha-tubulin [Eucalyptus grandis] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.885e-10
Putative C-terminus
sp_v3.0_unigene144126 SustainPine v3.0 329
AutoFact: Histone H3 n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LR62_9ALVE 6.0e-06
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 1.152e-29
Putative C-terminus
sp_v3.0_unigene144483 SustainPine v3.0 707
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Alpha tubulin 8.085e-19
C-terminus
sp_v3.0_unigene144778 SustainPine v3.0 602
AutoFact: ribosomal protein L17-1 [Poa secunda] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S29 2.935e-20
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain