Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mRNA modification

Term: GO:0016556  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49736 SustainPine v3.0 410
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.21e-31
C-terminus
sp_v3.0_unigene50183 SustainPine v3.0 614
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.902e-14
C-terminus
sp_v3.0_unigene50541 SustainPine v3.0 161
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene50994 SustainPine v3.0 415
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RIP1_RICCO 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.34e-14
C-terminus
sp_v3.0_unigene51773 SustainPine v3.0 455
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 7.559e-18
Internal
sp_v3.0_unigene51811 SustainPine v3.0 446
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 9.123e-10
Internal
sp_v3.0_unigene51827 SustainPine v3.0 459
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor emb|CAB511 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 7.132e-23
Internal
sp_v3.0_unigene51935 SustainPine v3.0 466
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3A6_ARALL 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.437e-07
Internal
sp_v3.0_unigene52216 SustainPine v3.0 417
• AutoFact: Pentatricopeptide repeat protein 71 n=1 Tax=Funaria hygrometrica RepID=F5CAD9_FUNHY 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52806 SustainPine v3.0 425
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.501e-24
Internal
sp_v3.0_unigene53789 SustainPine v3.0 402
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8H7_RICCO 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_36, whole genome shotgun sequence 5.397e-06
N-terminus
sp_v3.0_unigene53964 SustainPine v3.0 165
• AutoFact: Pentatricopeptide repeat protein 45 n=2 Tax=Funariaceae RepID=F5CAE4_FUNHY 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.987e-12
C-terminus
sp_v3.0_unigene54116 SustainPine v3.0 357
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.879e-09
Internal
sp_v3.0_unigene54514 SustainPine v3.0 443
• AutoFact: Putative pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S263_ORYSJ 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.011e-11
Putative Complete
sp_v3.0_unigene54649 SustainPine v3.0 239
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.294e-14
Internal
sp_v3.0_unigene54741 SustainPine v3.0 399
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene56685 SustainPine v3.0 406
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990 gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.807e-12
Internal
sp_v3.0_unigene57376 SustainPine v3.0 373
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene57432 SustainPine v3.0 383
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene57552 SustainPine v3.0 441
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.388e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain