Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosome biogenesis GTPase RsgA, putative

Term: IPR004881  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1160 SustainPine v3.0 1204
• AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMG0_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene19199 SustainPine v3.0 320
• AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene44774 SustainPine v3.0 201
unknown
sp_v3.0_unigene68634 SustainPine v3.0 270
• AutoFact: ribosome-associated GTPase [Cyanothece sp. CCY0110] gb|EAZ93119.1| ribosome-associated GTPase [Cyanothece sp. CCY0110] 7.0e-08
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Putative C-terminus
sp_v3.0_unigene73961 SustainPine v3.0 466
• AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene74482 SustainPine v3.0 254
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene129246 SustainPine v3.0 945
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene164168 SustainPine v3.0 412
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene185042 SustainPine v3.0 651
• AutoFact: ribosome-associated GTPase [Cyanothece sp. CCY0110] gb|EAZ93119.1| ribosome-associated GTPase [Cyanothece sp. CCY0110] 4.0e-15
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene210287 SustainPine v3.0 449
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain