Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cotyledon vascular tissue pattern formation

Term: GO:0010588  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1080 SustainPine v3.0 1884
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene1168 SustainPine v3.0 1919
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 7.882e-12
C-terminus
sp_v3.0_unigene4541 SustainPine v3.0 871
AutoFact: pfam01535, PPR, PPR repeat 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 8.677e-13
Putative C-terminus
sp_v3.0_unigene4626 SustainPine v3.0 468
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.777e-12
N-terminus
sp_v3.0_unigene4661 SustainPine v3.0 323
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal
sp_v3.0_unigene4697 SustainPine v3.0 372
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal
sp_v3.0_unigene7784 SustainPine v3.0 1703
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene8377 SustainPine v3.0 1442
AutoFact: U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] emb|CAC01842.1| putative protein [Arabidopsis thaliana] gb|AED92337.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene9351 SustainPine v3.0 817
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Root phototropism protein, putative 4.636e-14
Internal
sp_v3.0_unigene10676 SustainPine v3.0 1723
AutoFact: U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] emb|CAC01842.1| putative protein [Arabidopsis thaliana] gb|AED92337.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene10787 SustainPine v3.0 641
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 8.306e-12
Putative C-terminus
sp_v3.0_unigene11368 SustainPine v3.0 1388
AutoFact: pfam12854, PPR_1, PPR repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.5e-10
Internal
sp_v3.0_unigene13631 SustainPine v3.0 798
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.181e-17
Internal
sp_v3.0_unigene13985 SustainPine v3.0 1136
AutoFact: protein CVP2 like 1 [Arabidopsis thaliana] ref|NP_001189654.1| protein CVP2 like 1 [Arabidopsis thaliana] dbj|BAF00758.1| putative inositol polyphosphate 5'-phosphatase [Arabidopsis thaliana] gb|AEC08621.1| protein CVP2 like 1 [Arabidopsis thaliana] gb|AE 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 2.796e-24
Putative Complete
sp_v3.0_unigene14689 SustainPine v3.0 956
AutoFact: inositol-1, 4, 5-trisphosphate 5-Phosphatase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 5.122e-29
Internal
sp_v3.0_unigene15034 SustainPine v3.0 627
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.887e-12
N-terminus
sp_v3.0_unigene15688 SustainPine v3.0 587
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.269e-09
Putative C-terminus
sp_v3.0_unigene16676 SustainPine v3.0 683
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.287e-15
Internal
sp_v3.0_unigene17940 SustainPine v3.0 2129
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 8.252e-10
C-terminus
sp_v3.0_unigene18397 SustainPine v3.0 949
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 9.02e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain