Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cotyledon vascular tissue pattern formation

Term: GO:0010588  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66739 SustainPine v3.0 370
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3A6_ARALL 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.389e-13
Putative N-terminus
sp_v3.0_unigene66780 SustainPine v3.0 391
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SKC9_RICCO 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.285e-20
Internal
sp_v3.0_unigene66946 SustainPine v3.0 424
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.023e-12
Internal
sp_v3.0_unigene67659 SustainPine v3.0 301
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene68253 SustainPine v3.0 235
• AutoFact: Os03g0793600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DMU2_ORYSJ 9.0e-23
• FL-Next: Isoform 2 of Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 0.0
• Sma3: Type I inositol polyphosphate 5-phosphatase, putative 5.032e-29
Internal
sp_v3.0_unigene68317 SustainPine v3.0 331
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 3.098e-10
Internal
sp_v3.0_unigene69919 SustainPine v3.0 352
• AutoFact: putative inositol polyphosphate 5'-phosphatase [Arabidopsis thaliana] 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type I inositol polyphosphate 5-phosphatase, putative 8.132e-33
Internal
sp_v3.0_unigene70292 SustainPine v3.0 450
• AutoFact: PPR domain containing protein 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.1e-11
N-terminus
sp_v3.0_unigene70324 SustainPine v3.0 360
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.168e-08
Internal
sp_v3.0_unigene70624 SustainPine v3.0 396
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.189e-16
Internal
sp_v3.0_unigene70886 SustainPine v3.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 6.937e-12
Internal
sp_v3.0_unigene70926 SustainPine v3.0 343
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.869e-14
N-terminus
sp_v3.0_unigene72307 SustainPine v3.0 270
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.585e-09
C-terminus
sp_v3.0_unigene72671 SustainPine v3.0 297
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.104e-30
Internal
sp_v3.0_unigene72811 SustainPine v3.0 204
• AutoFact: putative phosphatase (with alternative splicing) [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: Isoform 2 of Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 0.0
• Sma3: Type I inositol polyphosphate 5-phosphatase, putative 2.957e-21
Internal
sp_v3.0_unigene73812 SustainPine v3.0 379
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 3.738e-07
Internal
sp_v3.0_unigene74121 SustainPine v3.0 334
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.429e-10
Internal
sp_v3.0_unigene74257 SustainPine v3.0 369
• AutoFact: endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] dbj|BAE99729.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09399.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] 9.0e-26
• FL-Next: sp=Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Type I inositol polyphosphate 5-phosphatase, putative 7.224e-18
Internal
sp_v3.0_unigene74527 SustainPine v3.0 316
• AutoFact: pfam03000, NPH3, NPH3 family 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein Mutator sub-class 1.69e-16
Internal
sp_v3.0_unigene74551 SustainPine v3.0 378
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.808e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain