Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: poly(U) RNA binding

Term: GO:0008266  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene140827 SustainPine v3.0 635
• AutoFact: RecName: Full=Ferredoxin--NADP reductase, chloroplastic; Short=FNR; Flags: Precursor gb|AAA33029.1| ferredoxin-NADP+ reductase precursor [Mesembryanthemum crystallinum] prf||1604475A ferredoxin NADP reductase 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferredoxin--NADP reductase 2.331e-27
C-terminus
sp_v3.0_unigene141393 SustainPine v3.0 287
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 33 kDa subunit 7.061e-30
Internal
sp_v3.0_unigene142292 SustainPine v3.0 991
• AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 5.03066e-42
Complete
sp_v3.0_unigene143508 SustainPine v3.0 292
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBP_FRIAG 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 1.60028e-42
Internal
sp_v3.0_unigene143804 SustainPine v3.0 575
• AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 23 kDa subunit 3.72e-27
N-terminus
sp_v3.0_unigene149672 SustainPine v3.0 322
• AutoFact: Oxygen evolving enhancer protein 1 n=2 Tax=rosids RepID=F2XX49_LITCN 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 2.817e-40
Internal
sp_v3.0_unigene150830 SustainPine v3.0 527
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ31_PHYPA 1.99993e-41
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene151578 SustainPine v3.0 445
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=GLYA_CELJU 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene151624 SustainPine v3.0 382
• AutoFact: 33kDa oxygen evolving protein of photosystem II (Fragment) n=1 Tax=Nephroselmis olivacea RepID=A9CM98_NEPOL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 3.48899e-40
C-terminus
sp_v3.0_unigene151775 SustainPine v3.0 498
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y594_PHATC 2.99878e-43
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene153014 SustainPine v3.0 439
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSBP_CHLRE 8.0e-24
• FL-Next: tr=Oxygen-evolving enhancer protein 2; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: OEE2 1.79226e-42
C-terminus
sp_v3.0_unigene156806 SustainPine v3.0 594
• AutoFact: Isoform Delta-2 of Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform n=8 Tax=Eutheria RepID=Q14738-2 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein phosphatase 2a, regulatory subunit, putative 4.824e-22
Putative C-terminus
sp_v3.0_unigene157330 SustainPine v3.0 479
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Dictyostelium purpureum RepID=F0ZDZ0_DICPU 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene159102 SustainPine v3.0 265
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus flavus NRRL3357] dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED53406.1| heterogen 1.0e-21
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 7.776e-30
N-terminus
sp_v3.0_unigene159415 SustainPine v3.0 483
• AutoFact: Putative serine hydroxymethyltransferase, mitochondrial n=2 Tax=Sordariaceae RepID=GLYM_NEUCR 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene192746 SustainPine v3.0 509
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Ostreococcus RepID=Q00SC2_OSTTA 2.0e-33
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene194740 SustainPine v3.0 342
• AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 6.0e-14
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.367e-11
C-terminus
sp_v3.0_unigene206468 SustainPine v3.0 253
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 8.25701e-41
C-terminus
sp_v3.0_unigene208871 SustainPine v3.0 98
• AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 1.0e-10
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene208960 SustainPine v3.0 763
• AutoFact: cold-related protein Cor413 [Gossypium barbadense] gb|ABI97481.1| COR413-like protein [Gossypium barbadense] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cold acclimation protein WCOR413-like protein 4.994e-17
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain