Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromosome, telomeric region

Term: GO:0000781  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene955 SustainPine v3.0 2577
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene11966 SustainPine v3.0 746
AutoFact: DNA repair protein RAD50, putative n=1 Tax=Ricinus communis RepID=B9S9Y8_RICCO 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 9.67e-09
N-terminus
sp_v3.0_unigene52119 SustainPine v3.0 384
AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 9.0e-13
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene66602 SustainPine v3.0 248
AutoFact: telomere binding protein [Solanum lycopersicum] 4.0e-15
FL-Next: Isoform 4 of Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1 0.0
Sma3: MYB transcription factor 1.695e-08
Putative C-terminus
sp_v3.0_unigene95647 SustainPine v3.0 488
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 2.261e-13
C-terminus
sp_v3.0_unigene99463 SustainPine v3.0 669
AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104852 SustainPine v3.0 491
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 7.0e-30
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161996 SustainPine v3.0 237
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 9.0e-29
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 9.837e-09
C-terminus
sp_v3.0_unigene162511 SustainPine v3.0 175
AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 0.0001
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163085 SustainPine v3.0 205
AutoFact: DNA recombination/repair protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PXH9_9MYCE 2.0e-15
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 8.081e-09
Internal
sp_v3.0_unigene166997 SustainPine v3.0 261
AutoFact: Telomerase reverse transcriptase catalytic subunit n=5 Tax=Doryanthes excelsa RepID=D5MD96_9ASPA 3.0e-27
FL-Next: sp=Telomerase reverse transcriptase; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Telomerase reverse transcriptase 2.982e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain