Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Endonuclease III, iron-sulphur binding site

Term: IPR004035  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene67302 SustainPine v3.0 190
AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 5.0e-21
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.725e-08
Internal
sp_v3.0_unigene72796 SustainPine v3.0 156
AutoFact: Ubiquitin carrier protein (Fragment) n=2 Tax=Magnoliophyta RepID=Q677E9_HYAOR 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 2.542e-19
Internal
sp_v3.0_unigene76940 SustainPine v3.0 140
AutoFact: Endonuclease III, putative n=1 Tax=Ricinus communis RepID=B9T798_RICCO 7.0e-10
FL-Next: tr=Endonuclease III, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene77193 SustainPine v3.0 153
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.284e-08
Internal
sp_v3.0_unigene78356 SustainPine v3.0 208
AutoFact: Ubiquitin carrier protein n=2 Tax=Pucciniales RepID=E3JRY6_PUCGT 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 3.762e-13
Putative Complete
sp_v3.0_unigene101738 SustainPine v3.0 397
AutoFact: endonuclease III homologue [Oryza sativa Japonica Group] gb|AAX96333.1| endonuclease III homologue [Oryza sativa Japonica Group] gb|EEC67986.1| hypothetical protein OsI_35754 [Oryza sativa Indica Group] gb|EEE51951.1| hypothetical protein OsJ_33589 [Oryza 5.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene103111 SustainPine v3.0 513
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 3.0e-27
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.103e-08
Internal
sp_v3.0_unigene103573 SustainPine v3.0 749
AutoFact: HhH-GPD domain containing protein 6.0e-16
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA glycosylase 2.265e-10
Internal
sp_v3.0_unigene106675 SustainPine v3.0 223
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-20
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 9.835e-09
Internal
sp_v3.0_unigene152050 SustainPine v3.0 195
AutoFact: Ubiquitin carrier protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C433_9EUKA 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Internal
sp_v3.0_unigene152077 SustainPine v3.0 457
AutoFact: Ubiquitin carrier protein n=2 Tax=Dictyosteliida RepID=D3BQS8_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 4.316e-43
C-terminus
sp_v3.0_unigene152783 SustainPine v3.0 570
AutoFact: ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] gb|EAL42926.1| ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 6.73e-36
Complete
sp_v3.0_unigene155701 SustainPine v3.0 390
AutoFact: Endonuclease III homolog n=1 Tax=Schizosaccharomyces pombe 972h- RepID=NTH1_SCHPO 1.0e-36
FL-Next: tr=Predicted protein; Ostreococcus lucimarinus (strain CCE9901). 0.0
Internal
sp_v3.0_unigene183075 SustainPine v3.0 637
AutoFact: ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] gb|EAL42926.1| ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 6.378e-36
Complete
sp_v3.0_unigene208683 SustainPine v3.0 407
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 5.60519e-45
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.514e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain