Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Endonuclease III-like, iron-sulphur cluster loop motif

Term: IPR003651  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene45623 SustainPine v3.0 339
AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 6.99949e-42
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.526e-08
Internal
sp_v3.0_unigene48078 SustainPine v3.0 402
AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene52012 SustainPine v3.0 212
AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 8.0e-30
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.712e-08
Internal
sp_v3.0_unigene57981 SustainPine v3.0 407
AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Vitis vinifera RepID=D7TND2_VITVI 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 5.69e-15
N-terminus
sp_v3.0_unigene58039 SustainPine v3.0 202
AutoFact: Protein ROS1, putative n=1 Tax=Ricinus communis RepID=B9SRG6_RICCO 1.0e-17
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Internal
sp_v3.0_unigene64107 SustainPine v3.0 209
AutoFact: Os02g0494700 protein n=2 Tax=Oryza sativa RepID=Q0E138_ORYSJ 5.0e-21
FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Repressor of silencing 1 2.159e-08
Internal
sp_v3.0_unigene65115 SustainPine v3.0 227
AutoFact: Isoform 2 of Transcriptional activator DEMETER n=1 Tax=Arabidopsis thaliana RepID=Q8LK56-2 6.0e-14
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 6.042e-09
Internal
sp_v3.0_unigene67302 SustainPine v3.0 190
AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 5.0e-21
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.725e-08
Internal
sp_v3.0_unigene72796 SustainPine v3.0 156
AutoFact: Ubiquitin carrier protein (Fragment) n=2 Tax=Magnoliophyta RepID=Q677E9_HYAOR 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 2.542e-19
Internal
sp_v3.0_unigene76940 SustainPine v3.0 140
AutoFact: Endonuclease III, putative n=1 Tax=Ricinus communis RepID=B9T798_RICCO 7.0e-10
FL-Next: tr=Endonuclease III, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene77193 SustainPine v3.0 153
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.284e-08
Internal
sp_v3.0_unigene78356 SustainPine v3.0 208
AutoFact: Ubiquitin carrier protein n=2 Tax=Pucciniales RepID=E3JRY6_PUCGT 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 3.762e-13
Putative Complete
sp_v3.0_unigene81298 SustainPine v3.0 217
AutoFact: Quinone oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9TA76_RICCO 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplastic quinone-oxidoreductase 2.058e-12
Internal
sp_v3.0_unigene101224 SustainPine v3.0 419
AutoFact: Nuclear cap-binding protein subunit 2 n=2 Tax=Arabidopsis RepID=NCBP2_ARATH 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear cap-binding protein 4.509e-11
Internal
sp_v3.0_unigene101738 SustainPine v3.0 397
AutoFact: endonuclease III homologue [Oryza sativa Japonica Group] gb|AAX96333.1| endonuclease III homologue [Oryza sativa Japonica Group] gb|EEC67986.1| hypothetical protein OsI_35754 [Oryza sativa Indica Group] gb|EEE51951.1| hypothetical protein OsJ_33589 [Oryza 5.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene103111 SustainPine v3.0 513
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 3.0e-27
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.103e-08
Internal
sp_v3.0_unigene103573 SustainPine v3.0 749
AutoFact: HhH-GPD domain containing protein 6.0e-16
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA glycosylase 2.265e-10
Internal
sp_v3.0_unigene106675 SustainPine v3.0 223
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-20
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 9.835e-09
Internal
sp_v3.0_unigene151063 SustainPine v3.0 317
AutoFact: PREDICTED: nuclear cap-binding protein subunit 2-like n=1 Tax=Meleagris gallopavo RepID=UPI0002035C1F 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear cap-binding protein 3.771e-11
Internal
sp_v3.0_unigene152050 SustainPine v3.0 195
AutoFact: Ubiquitin carrier protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C433_9EUKA 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain