Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: polygalacturonase activity

Term: GO:0004650  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene163794 SustainPine v3.0 308
• AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polygalacturonase 3.283e-06
Internal
sp_v3.0_unigene163963 SustainPine v3.0 296
• AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polygalacturonase 1.487e-19
Internal
sp_v3.0_unigene165729 SustainPine v3.0 420
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.107e-36
Internal
sp_v3.0_unigene168171 SustainPine v3.0 279
• AutoFact: Contains similarity to a polygalacturonase-like protein gi|7529266 from Arabidopsis thaliana BAC F18P9 gb|AL138654 and contains multiple polygalacturonase (pectinase) PF|00295 domains 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polygalacturonase 2.66e-19
Internal
sp_v3.0_unigene185122 SustainPine v3.0 481
• AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene194393 SustainPine v3.0 316
• AutoFact: Putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase n=3 Tax=Arabidopsis RepID=F4IFC5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain