Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: polygalacturonase activity

Term: GO:0004650  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene51540 SustainPine v3.0 585
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAL16105.1|AF428273_1 AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AAM91456.1| AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AEE84265.1| Pectin lyase-like protein [Arabidopsis thaliana] 4.0e-24
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene52645 SustainPine v3.0 218
AutoFact: Unassigned protein
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53026 SustainPine v3.0 470
AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 6.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.153e-16
Internal
sp_v3.0_unigene53334 SustainPine v3.0 446
AutoFact: putative polygalacturonase / pectinase [Arabidopsis thaliana] emb|CAA66811.1| polygalacturonase-like protein [Arabidopsis thaliana] dbj|BAB01843.1| polygalacturonase [Arabidopsis thaliana] dbj|BAC42276.1| putative polygalacturonase [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53935 SustainPine v3.0 94
AutoFact: Putative polygalacturonase n=2 Tax=Oryza sativa RepID=Q5VS63_ORYSJ 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycoside hydrolase, family 28 6.102e-11
Internal
sp_v3.0_unigene55540 SustainPine v3.0 318
AutoFact: pfam00665, rve, Integrase core domain 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.377e-08
Internal
sp_v3.0_unigene57972 SustainPine v3.0 525
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.177e-29
Internal
sp_v3.0_unigene59367 SustainPine v3.0 293
AutoFact: rve domain containing protein 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, unclassified 1.359e-08
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene60924 SustainPine v3.0 109
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana] emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana] gb|AAL32775.1| 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 4.452e-13
Internal
sp_v3.0_unigene61554 SustainPine v3.0 234
AutoFact: Glyco_hydro_28 domain containing protein 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 1.67e-12
Internal
sp_v3.0_unigene61723 SustainPine v3.0 311
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61982 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 5.0e-06
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene61996 SustainPine v3.0 223
AutoFact: Glycoside hydrolase, family 28 [Medicago truncatula] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 9.59e-37
Internal
sp_v3.0_unigene62273 SustainPine v3.0 268
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAM14020.1| unknown protein [Arabidopsis thaliana] gb|AAM91751.1| unknown protein [Arabidopsis thaliana] gb|AED95784.1| glycoside hydrolase fami 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 1.501e-06
Putative N-terminus
sp_v3.0_unigene64212 SustainPine v3.0 209
AutoFact: Quartet 3 (Fragment) n=1 Tax=Picea abies RepID=B2KZH0_PICAB 8.0e-14
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus
sp_v3.0_unigene65388 SustainPine v3.0 255
AutoFact: Unassigned protein 2.0e-33
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal
sp_v3.0_unigene66746 SustainPine v3.0 223
AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene71034 SustainPine v3.0 154
AutoFact: polygalacturonase [Cucumis sativus] 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollen allergen 4.604e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain