Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription factor complex

Term: GO:0005667  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene675 SustainPine v3.0 2521
AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Repressor, antagonist of e2f-dp complex 1.229e-08
Complete
sp_v3.0_unigene1876 SustainPine v3.0 2292
AutoFact: TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TFIIB-related protein 2.662e-13
C-terminus
sp_v3.0_unigene2177 SustainPine v3.0 1767
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene2912 SustainPine v3.0 1919
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.01e-20
C-terminus
sp_v3.0_unigene4407 SustainPine v3.0 153
AutoFact: Dp_E2F-Like (IC) [Ostreococcus tauri] gb|AAV68606.1| DP-E2F-like protein [Ostreococcus tauri] emb|CAL55026.1| Dp_E2F-Like (IC) [Ostreococcus tauri] 1.0e-07
FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Internal
sp_v3.0_unigene5131 SustainPine v3.0 2164
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.035e-08
Complete
sp_v3.0_unigene5699 SustainPine v3.0 2149
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.19e-08
Complete
sp_v3.0_unigene8034 SustainPine v3.0 1057
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Complete
sp_v3.0_unigene8256 SustainPine v3.0 2040
AutoFact: Os01g0570500 protein n=3 Tax=Oryza sativa RepID=Q656Y0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 6.426e-26
Complete
sp_v3.0_unigene11462 SustainPine v3.0 2363
AutoFact: Casein kinase n=1 Tax=Beta vulgaris RepID=A2I5G0_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 1.418e-33
Complete
sp_v3.0_unigene15121 SustainPine v3.0 1830
AutoFact: Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana] dbj|BAE98795.1| putative transcription factor [Arabidopsis thaliana] gb|AEE74756.1| Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20143 SustainPine v3.0 2267
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 9.041e-21
Complete
sp_v3.0_unigene24082 SustainPine v3.0 1664
AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 1.884e-11
Complete
sp_v3.0_unigene32109 SustainPine v3.0 3020
AutoFact: casein kinase I-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 1.018e-29
Complete
sp_v3.0_unigene33024 SustainPine v3.0 535
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 6.0e-30
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
N-terminus
sp_v3.0_unigene37214 SustainPine v3.0 2343
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.295e-08
Complete
sp_v3.0_unigene37581 SustainPine v3.0 1202
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.155e-08
N-terminus
sp_v3.0_unigene37592 SustainPine v3.0 934
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 8.0e-34
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 6.907e-19
C-terminus
sp_v3.0_unigene40775 SustainPine v3.0 1452
AutoFact: Casein kinase, putative n=1 Tax=Ricinus communis RepID=B9RK86_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 9.331e-26
Putative C-terminus
sp_v3.0_unigene40858 SustainPine v3.0 1794
AutoFact: casein kinase [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 3.019e-33
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain