Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: CCAAT-binding factor complex

Term: GO:0016602  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene560 SustainPine v3.0 2467
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: YA5 4.993e-08
Complete
sp_v3.0_unigene11145 SustainPine v3.0 1798
AutoFact: Contains similarity to gb|Y13720 Hap2a transcription factor from Arabidopsis thaliana 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 3.757e-13
Putative Complete
sp_v3.0_unigene11316 SustainPine v3.0 2168
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 6.06e-10
Complete
sp_v3.0_unigene13239 SustainPine v3.0 815
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene15050 SustainPine v3.0 1401
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] gb|ABF96565.1| CCAAT-box transcription factor complex WHAP3, putative, expressed [Oryza sativa Japonica Group] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-7 2.159e-08
N-terminus
sp_v3.0_unigene25256 SustainPine v3.0 1872
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 5.0e-40
FL-Next: sp=Nuclear transcription factor Y subunit A-7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 1.432e-16
Complete
sp_v3.0_unigene36126 SustainPine v3.0 908
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.506e-37
N-terminus
sp_v3.0_unigene37737 SustainPine v3.0 1967
AutoFact: nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] gb|AEE31233.1| nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene54150 SustainPine v3.0 108
AutoFact: Os07g0528100 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0D5X2_ORYSJ 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55941 SustainPine v3.0 289
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.267e-11
Putative N-terminus
sp_v3.0_unigene58947 SustainPine v3.0 198
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene59903 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 8.0e-29
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Putative uncharacterized protein 9.904e-14
Internal
sp_v3.0_unigene61914 SustainPine v3.0 292
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.596e-32
Internal
sp_v3.0_unigene63282 SustainPine v3.0 210
AutoFact: Unassigned protein 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene64897 SustainPine v3.0 154
AutoFact: Orf490 protein n=4 Tax=Oryza RepID=Q8HCR1_ORYSJ 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.205e-36
Internal
sp_v3.0_unigene66130 SustainPine v3.0 395
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene70338 SustainPine v3.0 369
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 3.639e-11
N-terminus
sp_v3.0_unigene72114 SustainPine v3.0 229
AutoFact: RVT_2 domain containing protein 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.176e-27
Putative N-terminus
sp_v3.0_unigene79482 SustainPine v3.0 368
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.26e-07
Internal
sp_v3.0_unigene97367 SustainPine v3.0 1927
AutoFact: [K] COG5224 CCAAT-binding factor, subunit B 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: YA3 4.799e-08
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain