Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA repair metallo-beta-lactamase

Term: IPR011084  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77432 SustainPine v3.0 399
AutoFact: sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana] gb|AAC28555.1| hypothetical protein [Arabidopsis thaliana] gb|AAM14896.1| hypothetical protein [Arabidopsis thaliana] gb|AAO64178.1| unknown protein [Arabidopsis thaliana] gb|AAP04 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene79078 SustainPine v3.0 280
AutoFact: DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene81209 SustainPine v3.0 211
AutoFact: DNA cross-link repair protein SNM1 [Arabidopsis thaliana] ref|NP_850635.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana] ref|NP_001030773.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana] sp|Q38961.1|SNM1_ARATH RecName: Full=DNA cro 9.0e-13
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA cross-link repair protein SNM1 9.747e-06
Internal
sp_v3.0_unigene94757 SustainPine v3.0 846
AutoFact: Snm1 n=4 Tax=Oryza sativa RepID=Q5NSW7_ORYSJ 0.0
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA cross-link repair protein pso2/snm1, putative 1.967e-08
Internal
sp_v3.0_unigene101377 SustainPine v3.0 769
AutoFact: DNA repair metallo-beta-lactamase n=1 Tax=Medicago truncatula RepID=Q2HRV5_MEDTR 3.0e-15
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene101452 SustainPine v3.0 788
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 5.431e-13
Internal
sp_v3.0_unigene105398 SustainPine v3.0 420
AutoFact: DNA ligase-like n=2 Tax=Oryza sativa Japonica Group RepID=Q8RZQ7_ORYSJ 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: DNA ligase-like 1.964e-09
Internal
sp_v3.0_unigene107620 SustainPine v3.0 155
AutoFact: DNA cross-link repair protein pso2/snm1, putative n=1 Tax=Ricinus communis RepID=B9RQZ5_RICCO 1.0e-14
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene115079 SustainPine v3.0 544
AutoFact: DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene118250 SustainPine v3.0 365
AutoFact: Unassigned protein
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118414 SustainPine v3.0 528
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIV9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.799e-13
Internal
sp_v3.0_unigene119187 SustainPine v3.0 273
AutoFact: [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing 0.0001
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121256 SustainPine v3.0 392
AutoFact: DNA ligase n=1 Tax=Oryza sativa Japonica Group RepID=B9EYN2_ORYSJ 2.0e-15
FL-Next: sp=DNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene122073 SustainPine v3.0 426
AutoFact: Protein kinase [Medicago truncatula] gb|ABE91968.1| Protein kinase [Medicago truncatula] 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 1.366e-13
Internal
sp_v3.0_unigene124006 SustainPine v3.0 409
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 7.0e-28
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 2.193e-16
C-terminus
sp_v3.0_unigene164252 SustainPine v3.0 294
AutoFact: DNA ligase n=1 Tax=Ricinus communis RepID=B9SPY8_RICCO 1.0e-14
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Internal
sp_v3.0_unigene164598 SustainPine v3.0 209
AutoFact: protein kinase [Nicotiana tabacum] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 5.432e-07
Internal
sp_v3.0_unigene194895 SustainPine v3.0 505
AutoFact: DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain