Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cotyledon development

Term: GO:0048825  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene108067 SustainPine v3.0 404
AutoFact: cyclin-dependent kinase B1-2 [Nicotiana tabacum] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin dependent kinase 2.108e-13
Internal
sp_v3.0_unigene108314 SustainPine v3.0 557
AutoFact: cyclin-dependent kinase B [Scutellaria baicalensis] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinase 4.558e-14
N-terminus
sp_v3.0_unigene110535 SustainPine v3.0 193
AutoFact: Homeodomain transcription factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GB81_CUCME 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein WUSCHEL 8.858e-15
Internal
sp_v3.0_unigene112854 SustainPine v3.0 293
AutoFact: Protein kinase PINOID n=3 Tax=Brassicaceae RepID=O64682_ARATH 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.291e-33
Internal
sp_v3.0_unigene113409 SustainPine v3.0 388
AutoFact: Homeodomain protein HOX3 n=1 Tax=Gossypium hirsutum RepID=Q66Q67_GOSHI 6.02558e-44
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 3.336e-17
N-terminus
sp_v3.0_unigene116504 SustainPine v3.0 572
AutoFact: flavin-containing monooxygenase-like protein [Arabidopsis thaliana] sp|Q9SVU0.1|YUC8_ARATH RecName: Full=Flavin-containing monooxygenase YUCCA8 emb|CAA22980.1| putative protein [Arabidopsis thaliana] emb|CAB81460.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Flavin-containing monooxygenase YUCCA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Flavine-containing monoxygenase 2.454e-30
Internal
sp_v3.0_unigene116661 SustainPine v3.0 750
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Signal transducer, putative 4.421e-10
Internal
sp_v3.0_unigene117539 SustainPine v3.0 326
AutoFact: Ethylene-responsive transcription factor, putative n=1 Tax=Ricinus communis RepID=B9T1Y1_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.516e-38
N-terminus
sp_v3.0_unigene118819 SustainPine v3.0 338
AutoFact: Flavin-containing monooxygenase YUCCA n=3 Tax=Oryza sativa RepID=B1Q3E2_ORYSJ 2.0e-25
FL-Next: sp=Flavin-containing monooxygenase YUCCA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Monooxygenase, putative 9.663e-17
Internal
sp_v3.0_unigene121029 SustainPine v3.0 601
AutoFact: Flavine-containing monoxygenase n=2 Tax=Malpighiales RepID=B9GRA6_POPTR 0.0
FL-Next: sp=Flavin-containing monooxygenase YUCCA8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Flavine-containing monoxygenase 9.014e-38
Putative N-terminus
sp_v3.0_unigene121846 SustainPine v3.0 311
AutoFact: ethylene-responsive transcription factor ERF003 [Arabidopsis thaliana] sp|Q94AW5.1|ERF03_ARATH RecName: Full=Ethylene-responsive transcription factor ERF003 gb|AAK74017.1| AT5g25190/F21J6_103 [Arabidopsis thaliana] gb|AAL31157.1| AT5g25190/F21J6_103 [Arab 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene126053 SustainPine v3.0 213
AutoFact: PREDICTED: similar to putative serine/threonine protein kinase n=1 Tax=Vitis vinifera RepID=UPI00019841C9 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 9.049e-33
Internal
sp_v3.0_unigene126291 SustainPine v3.0 424
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 6.0e-27
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeodomain-related 1.159e-06
Internal
sp_v3.0_unigene127624 SustainPine v3.0 991
AutoFact: DRE binding factor 2 n=3 Tax=Oryza sativa RepID=Q7XZP8_ORYSJ 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 3.36312e-44
N-terminus
sp_v3.0_unigene127950 SustainPine v3.0 815
AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene129477 SustainPine v3.0 585
AutoFact: Putative cullin [Oryza sativa] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin protein 5.815e-12
C-terminus
sp_v3.0_unigene133059 SustainPine v3.0 339
AutoFact: Dehydration responsive element-binding protein 2 n=1 Tax=Gossypium hirsutum RepID=Q6IVL3_GOSHI 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene138297 SustainPine v3.0 510
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RG14_RICCO 5.0e-22
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Putative C-terminus
sp_v3.0_unigene138348 SustainPine v3.0 314
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 8.0e-38
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 1.33e-15
C-terminus
sp_v3.0_unigene139964 SustainPine v3.0 394
AutoFact: Frizzy panicle n=11 Tax=Oryza RepID=Q8H3Q1_ORYSJ 3.0e-25
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain