Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Uncharacterised protein family UPF0406

Term: IPR019146  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene395 SustainPine v3.0 936
AutoFact: uncharacterized protein [Arabidopsis thaliana] dbj|BAA97379.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67022.1| unknown [Arabidopsis thaliana] gb|AAO42327.1| unknown protein [Arabidopsis thaliana] gb|AAO64010.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene612 SustainPine v3.0 2210
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RH31_RICCO 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 7.585e-17
Complete
sp_v3.0_unigene5312 SustainPine v3.0 1758
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 1.046e-16
Complete
sp_v3.0_unigene14151 SustainPine v3.0 2468
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 7.907e-17
Complete
sp_v3.0_unigene18100 SustainPine v3.0 2358
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 4.665e-12
Complete
sp_v3.0_unigene62929 SustainPine v3.0 233
AutoFact: HVSL domain containing protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65779 SustainPine v3.0 205
AutoFact: dsRNA-binding protein 2 [Arabidopsis thaliana] sp|Q9SKN2.1|DRB2_ARATH RecName: Full=Double-stranded RNA-binding protein 2; AltName: Full=dsRNA-binding protein 2; Short=AtDRB2 gb|AAD20688.1| expressed protein [Arabidopsis thaliana] gb|AAK59481.1| unknown p 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 2.195e-12
Putative N-terminus
sp_v3.0_unigene71178 SustainPine v3.0 418
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDF6_PHYPA 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 8.582e-17
N-terminus
sp_v3.0_unigene102580 SustainPine v3.0 206
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDF6_PHYPA 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gb|AAD20688.1 6.584e-09
N-terminus
sp_v3.0_unigene127603 SustainPine v3.0 763
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 4.226e-12
Putative N-terminus
sp_v3.0_unigene134625 SustainPine v3.0 185
AutoFact: HVSL domain containing protein 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164570 SustainPine v3.0 309
AutoFact: HVSL domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene188307 SustainPine v3.0 176
AutoFact: HVSL domain containing protein 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene203763 SustainPine v3.0 231
AutoFact: HVSL domain containing protein 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain