Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26067 SustainPine v3.0 364
• AutoFact: 60S ribosomal protein L30 [Schizosaccharomyces pombe 972h-] sp|P52808.2|RL30A_SCHPO RecName: Full=60S ribosomal protein L30-1; AltName: Full=L32 gb|AAB17132.1| ribosomal protein Rpl32p [Schizosaccharomyces pombe] emb|CAB11499.1| 60S ribosomal protein L30 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L30 9.692e-18
Complete
sp_v3.0_unigene26087 SustainPine v3.0 340
• AutoFact: 60S ribosomal protein L32-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NH95_PHYIT 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.755e-07
C-terminus
sp_v3.0_unigene26180 SustainPine v3.0 354
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SVY4_PHYPA 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene26227 SustainPine v3.0 520
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 8.745e-28
C-terminus
sp_v3.0_unigene26266 SustainPine v3.0 445
• AutoFact: 60S ribosomal protein L5 n=2 Tax=Onchocercidae RepID=E1GB01_LOALO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.818e-14
N-terminus
sp_v3.0_unigene26274 SustainPine v3.0 728
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Chironomus thummi RepID=A2IA72_9DIPT 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene26278 SustainPine v3.0 586
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.514e-08
Internal
sp_v3.0_unigene26324 SustainPine v3.0 1013
• AutoFact: ribosomal protein L5b [Ictalurus punctatus] gb|AAK95129.1|AF401557_1 ribosomal protein L5b [Ictalurus punctatus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.932e-14
Complete
sp_v3.0_unigene26384 SustainPine v3.0 420
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 1.96182e-44
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene26430 SustainPine v3.0 540
• AutoFact: S60 ribosomal protein L7 n=1 Tax=Polysphondylium pallidum RepID=D3BVG5_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 2.054e-11
C-terminus
sp_v3.0_unigene26446 SustainPine v3.0 437
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene26458 SustainPine v3.0 752
• AutoFact: 60S ribosomal protein L15-1 n=8 Tax=Embryophyta RepID=RL15A_PICMA 0.0
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 0.0
Complete
sp_v3.0_unigene26471 SustainPine v3.0 267
• AutoFact: Ribosomal protein L15 n=1 Tax=Pfiesteria piscicida RepID=E8Z6E0_PFIPI 8.0e-19
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene26489 SustainPine v3.0 421
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBR7_THAPS 6.0e-38
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene26519 SustainPine v3.0 374
• AutoFact: PREDICTED: 60S ribosomal protein L36-like n=1 Tax=Callithrix jacchus RepID=UPI0001D38915 2.0e-28
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Complete
sp_v3.0_unigene26526 SustainPine v3.0 430
• AutoFact: Ribosomal protein L18a (Fragment) n=1 Tax=Podocoryna carnea RepID=O76968_PODCA 1.0e-35
• FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18a 2.785e-13
C-terminus
sp_v3.0_unigene26548 SustainPine v3.0 359
• AutoFact: 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] gb|EAW25351.1| 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene26575 SustainPine v3.0 571
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene26750 SustainPine v3.0 396
• AutoFact: Ribosomal protein L12e n=1 Tax=Scarabaeus laticollis RepID=Q4GXJ3_SCALT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.004e-15
C-terminus
sp_v3.0_unigene27180 SustainPine v3.0 710
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 4.228e-21
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain