Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene186009 SustainPine v3.0 467
• AutoFact: ribosomal protein L17 [Branchiostoma belcheri tsingtauense] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.195e-10
C-terminus
sp_v3.0_unigene186019 SustainPine v3.0 466
• AutoFact: putative hydroxyproline-rich glycoprotein 1 [Oryza sativa Japonica Group] dbj|BAD21553.1| putative hydroxyproline-rich glycoprotein 1 [Oryza sativa Japonica Group] gb|EAY86739.1| hypothetical protein OsI_08121 [Oryza sativa Indica Group] dbj|BAG68299.1| r 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 4.378e-16
Putative Complete
sp_v3.0_unigene186026 SustainPine v3.0 359
• AutoFact: Ribosomal protein L18 n=2 Tax=Chlamydomonadales RepID=A8IKZ2_CHLRE 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 3.163e-35
Putative N-terminus
sp_v3.0_unigene186058 SustainPine v3.0 434
• AutoFact: 60S ribosomal protein L31, putative n=2 Tax=Theileria RepID=Q4UIB6_THEAN 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 1.54143e-44
Complete
sp_v3.0_unigene186063 SustainPine v3.0 444
• AutoFact: 60S ribosomal protein L6 n=8 Tax=Poaceae RepID=Q7XR19_ORYSJ 1.0e-32
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene186072 SustainPine v3.0 539
• AutoFact: ribosomal protein L12 [Xenopus laevis] gb|AAH41240.1| Rpl12-prov protein [Xenopus laevis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
Complete
sp_v3.0_unigene186080 SustainPine v3.0 481
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXR6_COPC7 3.0e-22
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene186089 SustainPine v3.0 681
• AutoFact: Probable ribosome biogenesis protein RLP24 n=20 Tax=Amniota RepID=RLP24_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene186092 SustainPine v3.0 347
• AutoFact: 60s ribosomal protein L21 [Triticum aestivum] 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.372e-10
Putative C-terminus
sp_v3.0_unigene186104 SustainPine v3.0 528
• AutoFact: 60S ribosomal protein L18 n=14 Tax=Schizophora RepID=RL18_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene186106 SustainPine v3.0 554
• AutoFact: RL21, ribosomal protein 21, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YNM6_THAPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene186108 SustainPine v3.0 511
• AutoFact: Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus RepID=D7G033_ECTSI 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35a, putative 5.028e-09
Complete
sp_v3.0_unigene186114 SustainPine v3.0 431
• AutoFact: L35 n=1 Tax=Suberites domuncula RepID=Q4KTF0_SUBDO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.626e-18
Putative Complete
sp_v3.0_unigene186129 SustainPine v3.0 579
• AutoFact: Ribosomal protein L12 n=1 Tax=Anthopleura elegantissima RepID=Q2LGN5_ANTEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene186133 SustainPine v3.0 856
• AutoFact: Ribosomal protein n=13 Tax=Poaceae RepID=B7F845_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.274e-37
Complete
sp_v3.0_unigene186143 SustainPine v3.0 405
• AutoFact: ribosomal protein L24, putative [Oryza sativa Japonica Group] gb|EAY79967.1| hypothetical protein OsI_35131 [Oryza sativa Indica Group] gb|EAZ17457.1| hypothetical protein OsJ_32984 [Oryza sativa Japonica Group] 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.644e-11
N-terminus
sp_v3.0_unigene186171 SustainPine v3.0 658
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Complete
sp_v3.0_unigene186297 SustainPine v3.0 436
• AutoFact: Ribosomal protein n=2 Tax=Ixodes scapularis RepID=B7P3X5_IXOSC 3.9937e-43
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.512e-38
C-terminus
sp_v3.0_unigene186306 SustainPine v3.0 473
• AutoFact: 60S ribosomal protein L35 [Gallus gallus] sp|Q98TF7.3|RL35_CHICK RecName: Full=60S ribosomal protein L35 dbj|BAB21248.1| ribosomal protein L35 [Gallus gallus] 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.67e-18
Putative Complete
sp_v3.0_unigene186393 SustainPine v3.0 452
• AutoFact: ribosomal protein L5 [Argopecten irradians] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.874e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain