Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66954 SustainPine v3.0 334
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.419e-18
Internal
sp_v3.0_unigene67147 SustainPine v3.0 300
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.396e-08
Internal
sp_v3.0_unigene72020 SustainPine v3.0 191
AutoFact: TIR-NBS type disease resistance protein [Populus trichocarpa] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73584 SustainPine v3.0 340
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 2.00386e-43
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 7.915e-21
N-terminus
sp_v3.0_unigene73634 SustainPine v3.0 483
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene73692 SustainPine v3.0 427
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.005e-18
Internal
sp_v3.0_unigene75033 SustainPine v3.0 336
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 1.161e-34
Internal
sp_v3.0_unigene75042 SustainPine v3.0 361
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NBS/LRR 6.135e-08
Putative C-terminus
sp_v3.0_unigene76524 SustainPine v3.0 284
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NBS/LRR 8.587e-08
Internal
sp_v3.0_unigene76527 SustainPine v3.0 345
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.405e-24
Internal
sp_v3.0_unigene76592 SustainPine v3.0 297
AutoFact: laccase 6 [Arabidopsis thaliana] sp|Q9ZPY2.1|LAC6_ARATH RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Diphenol oxidase 6; AltName: Full=Urishiol oxidase 6; Flags: Precursor gb|AAD20177.1| putative laccase (diphe 8.0e-28
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene76888 SustainPine v3.0 297
AutoFact: Putative NBS-LRR protein G8029 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE85_PINMO 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TIR-NBS disease resistance-like protein 2.02e-07
Internal
sp_v3.0_unigene76925 SustainPine v3.0 238
AutoFact: NBS [Pinus taeda] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77144 SustainPine v3.0 290
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene77304 SustainPine v3.0 337
AutoFact: Putative NBS-LRR protein GM09 (Fragment) n=3 Tax=Pinus monticola RepID=Q6WE63_PINMO 3.0e-34
FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene77694 SustainPine v3.0 274
AutoFact: NBS/LRR [Pinus taeda] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene77915 SustainPine v3.0 299
AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RDW9_RICCO 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78136 SustainPine v3.0 370
AutoFact: putative WRKY transcription factor 35 [Arabidopsis thaliana] sp|O64747.1|WRK35_ARATH RecName: Full=Probable WRKY transcription factor 35; AltName: Full=WRKY DNA-binding protein 35 gb|AAK96201.1|AF404863_1 WRKY transcription factor 35 [Arabidopsis thaliana 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 2.826e-19
C-terminus
sp_v3.0_unigene78507 SustainPine v3.0 364
AutoFact: NBS/LRR [Pinus taeda] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79307 SustainPine v3.0 318
AutoFact: Putative NBS-LRR protein G9034 (Fragment) n=1 Tax=Pinus monticola RepID=Q6WE88_PINMO 2.0e-38
FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Sma3: NBS/LRR 7.117e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain