Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53007 SustainPine v3.0 442
• AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 3.546e-07
Internal
sp_v3.0_unigene53166 SustainPine v3.0 327
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.945e-07
Internal
sp_v3.0_unigene53211 SustainPine v3.0 244
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 8.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53298 SustainPine v3.0 515
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.658e-16
Internal
sp_v3.0_unigene53555 SustainPine v3.0 303
• AutoFact: putative receptor kinase 5 [Oryza sativa Japonica Group] 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 2.661e-20
Internal
sp_v3.0_unigene53612 SustainPine v3.0 297
• AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9AUZ1_ARATH 7.0e-23
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.503e-36
Internal
sp_v3.0_unigene53704 SustainPine v3.0 345
• AutoFact: FYVE domain containing protein 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 5.973e-22
Internal
sp_v3.0_unigene54016 SustainPine v3.0 264
• AutoFact: rve domain containing protein 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.386e-15
Internal
sp_v3.0_unigene54282 SustainPine v3.0 193
• AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54446 SustainPine v3.0 502
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis RepID=E5SB91_TRISP 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.06377e-44
Internal
sp_v3.0_unigene54634 SustainPine v3.0 208
• AutoFact: pfam01363, FYVE, FYVE zinc finger 9.0e-18
• FL-Next: tr=Putative ZR1 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Ran GTPase binding protein, putative 4.093e-16
Internal
sp_v3.0_unigene54682 SustainPine v3.0 226
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.359e-21
Internal
sp_v3.0_unigene54774 SustainPine v3.0 282
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55248 SustainPine v3.0 362
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55333 SustainPine v3.0 435
• AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 1.166e-07
Internal
sp_v3.0_unigene55480 SustainPine v3.0 505
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.286e-08
Internal
sp_v3.0_unigene55573 SustainPine v3.0 331
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene55958 SustainPine v3.0 198
• AutoFact: NBS-LRR disease resistance protein homologue [Hordeum vulgare] 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56373 SustainPine v3.0 390
• AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56983 SustainPine v3.0 320
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain