Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19573 SustainPine v3.0 351
AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
Internal
sp_v3.0_unigene20081 SustainPine v3.0 641
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 6.232e-22
Internal
sp_v3.0_unigene21429 SustainPine v3.0 583
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21538 SustainPine v3.0 1510
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.94273e-44
FL-Next: sp=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21553 SustainPine v3.0 470
AutoFact: putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene21882 SustainPine v3.0 536
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.704e-32
Internal
sp_v3.0_unigene22076 SustainPine v3.0 499
AutoFact: putative TIR/NBS/LRR disease resistance protein [Pinus taeda] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22146 SustainPine v3.0 670
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene22173 SustainPine v3.0 801
AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22653 SustainPine v3.0 953
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.176e-16
Putative Complete
sp_v3.0_unigene23530 SustainPine v3.0 1451
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.245e-07
Putative Complete
sp_v3.0_unigene24510 SustainPine v3.0 4728
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 3.169e-13
Complete
sp_v3.0_unigene25182 SustainPine v3.0 1403
AutoFact: plant intracellular ras group-related LRR 1 [Arabidopsis thaliana] dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana] gb|AAU95419.1| At5g05850 [Arabidopsis thaliana] gb|AAV59262.1| At5g05850 [Arabidopsis thaliana] gb|AAW57410.1| plant intracel 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat-containing protein, putative 8.701e-09
C-terminus
sp_v3.0_unigene26306 SustainPine v3.0 630
AutoFact: WRKY transcription factor 5 [Solanum tuberosum] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 8.853e-20
Putative C-terminus
sp_v3.0_unigene26793 SustainPine v3.0 883
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27686 SustainPine v3.0 619
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 1.723e-08
C-terminus
sp_v3.0_unigene28845 SustainPine v3.0 1489
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.814e-13
Internal
sp_v3.0_unigene29072 SustainPine v3.0 1087
AutoFact: Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAM47616.1|AC122147_5 Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAP51983.1| Protein kinase domain containing protein [Oryza sativa Japonica Group] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen-activated protein kinase kinase kinase, putative 1.481e-10
Internal
sp_v3.0_unigene29217 SustainPine v3.0 491
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene30927 SustainPine v3.0 231
AutoFact: TIR-NBS-LRR class disease resistance protein n=4 Tax=Arabidopsis thaliana RepID=F4I270_ARATH 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain