Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99422 SustainPine v3.0 1130
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SKK6_RICCO 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene100235 SustainPine v3.0 862
• AutoFact: TIR-NBS-LRR class disease resistance protein n=4 Tax=Arabidopsis thaliana RepID=F4I270_ARATH 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 5.063e-08
Putative N-terminus
sp_v3.0_unigene100302 SustainPine v3.0 747
• AutoFact: ABC transporter G family member 11 n=3 Tax=Arabidopsis RepID=AB11G_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 0.0
Internal
sp_v3.0_unigene100714 SustainPine v3.0 836
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 3.151e-09
Putative C-terminus
sp_v3.0_unigene100720 SustainPine v3.0 651
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene101452 SustainPine v3.0 788
• AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 5.431e-13
Internal
sp_v3.0_unigene101565 SustainPine v3.0 771
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.978e-11
Putative C-terminus
sp_v3.0_unigene102032 SustainPine v3.0 796
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 4.849e-09
N-terminus
sp_v3.0_unigene102782 SustainPine v3.0 406
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene102912 SustainPine v3.0 438
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 9.004e-08
Putative Complete
sp_v3.0_unigene103065 SustainPine v3.0 495
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.363e-35
Internal
sp_v3.0_unigene103083 SustainPine v3.0 568
• AutoFact: ATP-binding cassette transporter, subfamily G, member 14, group WBC protein PpABCG14 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SSA0_PHYPA 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 0.0
Internal
sp_v3.0_unigene103990 SustainPine v3.0 318
• AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 5.233e-19
Internal
sp_v3.0_unigene104264 SustainPine v3.0 560
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.614e-19
Internal
sp_v3.0_unigene104774 SustainPine v3.0 524
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 5.904e-11
Putative C-terminus
sp_v3.0_unigene105199 SustainPine v3.0 498
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 1.289e-08
Internal
sp_v3.0_unigene105534 SustainPine v3.0 226
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene105809 SustainPine v3.0 604
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 1.365e-07
Internal
sp_v3.0_unigene106002 SustainPine v3.0 589
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene106251 SustainPine v3.0 468
• AutoFact: TIR-NBS-LRR class disease resistance protein n=4 Tax=Arabidopsis thaliana RepID=F4I270_ARATH 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 4.617e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain