Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase II, large subunit, CTD

Term: IPR006569  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene120478 SustainPine v3.0 495
AutoFact: Glutathione peroxidase n=1 Tax=Taiwanofungus camphoratus RepID=B8K1J5_TAICA 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Putative Complete
sp_v3.0_unigene122235 SustainPine v3.0 423
AutoFact: T4B21.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZS85_ARATH 2.0e-12
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene126684 SustainPine v3.0 801
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; crystallinum). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene126716 SustainPine v3.0 340
AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 5.0e-22
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene126738 SustainPine v3.0 653
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene129220 SustainPine v3.0 314
coding
sp_v3.0_unigene135497 SustainPine v3.0 377
AutoFact: Pre-mRNA splicing factor [Solanum tuberosum] 9.0e-18
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene140028 SustainPine v3.0 421
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 1.0e-38
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene142276 SustainPine v3.0 610
AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene145360 SustainPine v3.0 389
AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 3.0e-38
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene148833 SustainPine v3.0 390
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 9.94922e-44
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene152429 SustainPine v3.0 359
AutoFact: Glutathione peroxidase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TEB6_VANPO 9.94922e-44
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene154820 SustainPine v3.0 137
AutoFact: Glutathione peroxidase n=1 Tax=Nelumbo nucifera RepID=A3FPF8_NELNU 2.0e-13
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene155950 SustainPine v3.0 393
AutoFact: Glutathione peroxidase n=4 Tax=Bacillus RepID=C3AX75_BACMY 1.0e-36
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene170514 SustainPine v3.0 434
AutoFact: Drf_FH1 multi-domain protein 2.0e-10
coding
sp_v3.0_unigene174162 SustainPine v3.0 217
AutoFact: FAP multi-domain protein 4.0e-09
Sma3: Glycine-rich protein 7.343e-09
coding
sp_v3.0_unigene189421 SustainPine v3.0 708
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Putative Complete
sp_v3.0_unigene191673 SustainPine v3.0 471
AutoFact: Glutathione peroxidase n=8 Tax=Rhipicephalinae RepID=Q2XW15_BOOMI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene198798 SustainPine v3.0 587
AutoFact: Glutathione peroxidase n=1 Tax=Taiwanofungus camphoratus RepID=B8K1J5_TAICA 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene204103 SustainPine v3.0 480
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 3.0e-17
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain