Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Isocitrate lyase/phosphorylmutase, conserved site

Term: IPR018523  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene262 SustainPine v3.0 778
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 1.757e-18
Putative N-terminus
sp_v3.0_unigene3601 SustainPine v3.0 1865
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 6.666e-34
Putative Complete
sp_v3.0_unigene3637 SustainPine v3.0 999
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene4380 SustainPine v3.0 447
AutoFact: Polyubiquitin 12 n=5 Tax=Eukaryota RepID=UBQ12_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.204e-07
Putative Complete
sp_v3.0_unigene4417 SustainPine v3.0 830
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative Complete
sp_v3.0_unigene4498 SustainPine v3.0 368
AutoFact: [O] COG5272 Ubiquitin 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin, putative 4.685e-07
Putative Complete
sp_v3.0_unigene4569 SustainPine v3.0 477
AutoFact: [O] COG5272 Ubiquitin 6.0e-36
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene4700 SustainPine v3.0 344
AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene5487 SustainPine v3.0 1564
AutoFact: putative alpha/beta hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6494 SustainPine v3.0 2143
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 3.151e-12
Putative Complete
sp_v3.0_unigene13348 SustainPine v3.0 473
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene13353 SustainPine v3.0 337
AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=Q41084_PINTA 1.0e-23
FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
Sma3: Isocitrate lyase 2.761e-38
N-terminus
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene17858 SustainPine v3.0 681
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene18398 SustainPine v3.0 663
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.777e-08
Complete
sp_v3.0_unigene20037 SustainPine v3.0 470
AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene20812 SustainPine v3.0 619
AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.083e-06
Putative Complete
sp_v3.0_unigene21734 SustainPine v3.0 574
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene21736 SustainPine v3.0 393
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.247e-08
Putative C-terminus
sp_v3.0_unigene27394 SustainPine v3.0 514
AutoFact: Ubiquitin/ribosomal protein S27 fusion protein n=2 Tax=Coelomata RepID=Q0ZD85_PECGU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain