Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase/SANT-associated, DNA binding

Term: IPR014012  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene54798 SustainPine v3.0 486
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene57049 SustainPine v3.0 478
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 2.447e-08
Internal
sp_v3.0_unigene57780 SustainPine v3.0 124
AutoFact: Unassigned protein
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene62720 SustainPine v3.0 292
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 1.0e-27
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.904e-09
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene76350 SustainPine v3.0 370
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Aspergillus oryzae RIB40 RepID=Q2U236_ASPOR 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.003e-08
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene78426 SustainPine v3.0 102
AutoFact: Chromatin remodeling complex subunit n=3 Tax=Populus trichocarpa RepID=B9HM77_POPTR 7.0e-08
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene80318 SustainPine v3.0 159
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 7.581e-09
Internal
sp_v3.0_unigene81284 SustainPine v3.0 164
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 2.121e-08
Internal
sp_v3.0_unigene93612 SustainPine v3.0 1821
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene97146 SustainPine v3.0 448
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 6.346e-17
Internal
sp_v3.0_unigene102773 SustainPine v3.0 562
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWI2/SNF2-like protein 1.397e-14
Internal
sp_v3.0_unigene102819 SustainPine v3.0 888
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 5.596e-09
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene107228 SustainPine v3.0 232
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 1.214e-08
Internal
sp_v3.0_unigene107806 SustainPine v3.0 277
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.006e-09
Internal
sp_v3.0_unigene107941 SustainPine v3.0 305
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 4.143e-17
Internal
sp_v3.0_unigene107997 SustainPine v3.0 196
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-30
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.042e-09
Internal
sp_v3.0_unigene110756 SustainPine v3.0 168
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 7.0e-10
FL-Next: tr=Os08g0177300 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain