Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Vps54-like

Term: IPR012501  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene252 SustainPine v3.0 1729
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.211e-18
Complete
sp_v3.0_unigene262 SustainPine v3.0 778
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 1.757e-18
Putative N-terminus
sp_v3.0_unigene327 SustainPine v3.0 1894
AutoFact: Caldesmon multi-domain protein 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxilin-like protein 2.43e-23
Complete
sp_v3.0_unigene2011 SustainPine v3.0 2853
AutoFact: Vacuolar protein sorting, putative n=1 Tax=Ricinus communis RepID=B9SLV8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3388 SustainPine v3.0 5791
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.603e-08
Complete
sp_v3.0_unigene3601 SustainPine v3.0 1865
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 6.666e-34
Putative Complete
sp_v3.0_unigene6494 SustainPine v3.0 2143
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 3.151e-12
Putative Complete
sp_v3.0_unigene9004 SustainPine v3.0 657
AutoFact: Herpes_gp2 multi-domain protein 2.0e-13
coding
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene14472 SustainPine v3.0 556
AutoFact: Vacuolar protein sorting, putative n=1 Tax=Ricinus communis RepID=B9SLV8_RICCO 2.0e-28
FL-Next: tr=Vacuolar protein sorting, putative; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene37081 SustainPine v3.0 1793
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 superfamily protein 1.226e-07
Putative C-terminus
sp_v3.0_unigene38831 SustainPine v3.0 714
AutoFact: vacuolar protein sorting [Aedes aegypti] gb|EAT47388.1| vacuolar protein sorting [Aedes aegypti] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene93612 SustainPine v3.0 1821
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene97146 SustainPine v3.0 448
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 6.346e-17
Internal
sp_v3.0_unigene101329 SustainPine v3.0 540
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene106853 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: OSJNBa0083I11.13 protein 9.747e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain