Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

Term: IPR002464  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene133034 SustainPine v3.0 465
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene133074 SustainPine v3.0 341
• AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 2.0e-24
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene134597 SustainPine v3.0 241
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 6.0e-15
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137378 SustainPine v3.0 262
• AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 5.0e-33
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 6.474e-14
Internal
sp_v3.0_unigene138934 SustainPine v3.0 403
• AutoFact: Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Arabidopsis thaliana RepID=Q8VY00_ARATH 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pre-mRNA splicing factor RNA helicase 7.997e-09
Internal
sp_v3.0_unigene148088 SustainPine v3.0 499
• AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX8_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.396e-10
Internal
sp_v3.0_unigene148818 SustainPine v3.0 174
• AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149236 SustainPine v3.0 299
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150725 SustainPine v3.0 263
• AutoFact: Adenylate kinase 2 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U5L3_9EUKA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151275 SustainPine v3.0 412
• AutoFact: PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 n=1 Tax=Ciona intestinalis RepID=UPI000180D1DC 8.0e-30
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene154320 SustainPine v3.0 392
• AutoFact: Adenylate kinase n=1 Tax=Methylocella silvestris BL2 RepID=KAD_METSB 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 4.232e-09
Internal
sp_v3.0_unigene154845 SustainPine v3.0 492
• AutoFact: Adenylate kinase (Fragment) n=1 Tax=Dictyostelium purpureum RepID=F0ZR41_DICPU 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 4.316e-09
C-terminus
sp_v3.0_unigene156066 SustainPine v3.0 439
• AutoFact: Mitochondrial adenylate kinase 2 n=1 Tax=Ictalurus punctatus RepID=E3TFU9_ICTPU 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 1, putative 1.764e-08
C-terminus
sp_v3.0_unigene156294 SustainPine v3.0 223
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 4.0e-24
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene156508 SustainPine v3.0 294
• AutoFact: DEAD/DEAH box helicase n=1 Tax=Polysphondylium pallidum RepID=D3B6F6_POLPA 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pre-mRNA splicing factor RNA helicase 8.172e-09
Internal
sp_v3.0_unigene159507 SustainPine v3.0 141
• AutoFact: putative RNA helicase [Oryza sativa Japonica Group] 3.0e-05
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene159577 SustainPine v3.0 479
• AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 1.361e-18
Internal
sp_v3.0_unigene160173 SustainPine v3.0 428
• AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 2.0e-36
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: MRNA splicing factor ATP-dependent RNA helicase (ISS) 2.525e-11
Internal
sp_v3.0_unigene160894 SustainPine v3.0 436
• AutoFact: Abscisic acid receptor PYL7 n=3 Tax=Brassicaceae RepID=PYL7_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 8.988e-18
Internal
sp_v3.0_unigene161070 SustainPine v3.0 389
• AutoFact: putative helicase [Oryza sativa Japonica Group] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent RNA helicase, putative 3.571e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain