Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene249 SustainPine v3.0 1114
• AutoFact: Arm domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 2.876e-11
C-terminus
sp_v3.0_unigene525 SustainPine v3.0 3047
• AutoFact: RecName: Full=Tubby-like F-box protein 5; Short=OsTLP5; AltName: Full=Tubby-like F-box protein 8; Short=OsTLP8 dbj|BAD08037.1| putative tubby-like protein [Oryza sativa Japonica Group] dbj|BAG89242.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubby protein 2.407e-15
Complete
sp_v3.0_unigene693 SustainPine v3.0 519
• AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene752 SustainPine v3.0 3626
• AutoFact: Sumo ligase, putative n=1 Tax=Ricinus communis RepID=B9SK46_RICCO 0.0
• FL-Next: sp=E3 SUMO-protein ligase SIZ1; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene993 SustainPine v3.0 1055
• AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 3.762e-16
Complete
sp_v3.0_unigene1269 SustainPine v3.0 1696
• AutoFact: nuclear protein localization protein 4-like protein [Arabidopsis thaliana] sp|Q9LYC2.1|NPL41_ARATH RecName: Full=NPL4-like protein 1 emb|CAB87745.1| putative protein [Arabidopsis thaliana] gb|AAK59569.1| unknown protein [Arabidopsis thaliana] gb|AAL07248. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NPL4 family protein 1.501e-09
Complete
sp_v3.0_unigene1492 SustainPine v3.0 2314
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubby protein 2.626e-15
Complete
sp_v3.0_unigene1575 SustainPine v3.0 2462
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone ubiquitination proteins group 1.374e-08
Complete
sp_v3.0_unigene1646 SustainPine v3.0 1512
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 62; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1701 SustainPine v3.0 1417
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase 6.105e-08
Complete
sp_v3.0_unigene1822 SustainPine v3.0 3048
• AutoFact: U-box multi-domain protein 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 1.27e-10
Complete
sp_v3.0_unigene1870 SustainPine v3.0 2573
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.86e-13
Putative Complete
sp_v3.0_unigene1940 SustainPine v3.0 1268
• AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 1.404e-08
C-terminus
sp_v3.0_unigene1965 SustainPine v3.0 1793
• AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 5.098e-10
Complete
sp_v3.0_unigene2015 SustainPine v3.0 1677
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2063 SustainPine v3.0 5319
• AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 1.42e-08
Putative Complete
sp_v3.0_unigene2136 SustainPine v3.0 1621
• AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 8.756e-14
C-terminus
sp_v3.0_unigene2256 SustainPine v3.0 3772
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone ubiquitination proteins group 1.003e-08
Complete
sp_v3.0_unigene2310 SustainPine v3.0 779
• AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 5.237e-09
Internal
sp_v3.0_unigene2485 SustainPine v3.0 3456
• AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 9.136e-11
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain