Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17611 SustainPine v3.0 1020
• AutoFact: putative ring-box protein [Oryza sativa Japonica Group] dbj|BAD44884.1| putative ring-box protein [Oryza sativa Japonica Group] gb|EEE53718.1| hypothetical protein OsJ_00057 [Oryza sativa Japonica Group] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 2.48e-16
Complete
sp_v3.0_unigene18275 SustainPine v3.0 1384
• AutoFact: nuclear protein localization protein 4-like protein [Arabidopsis thaliana] sp|Q9LYC2.1|NPL41_ARATH RecName: Full=NPL4-like protein 1 emb|CAB87745.1| putative protein [Arabidopsis thaliana] gb|AAK59569.1| unknown protein [Arabidopsis thaliana] gb|AAL07248. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NPL4 family protein 1.501e-09
Complete
sp_v3.0_unigene19439 SustainPine v3.0 438
• AutoFact: Ubiquitin-conjugating enzyme E2 4 n=3 Tax=Brassicaceae RepID=UBC4_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 7.579e-30
N-terminus
sp_v3.0_unigene20419 SustainPine v3.0 721
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 9.0e-37
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 5.596e-09
Internal
sp_v3.0_unigene20442 SustainPine v3.0 1930
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9RU03_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene20502 SustainPine v3.0 2101
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene20851 SustainPine v3.0 3000
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
• Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene21112 SustainPine v3.0 496
• AutoFact: pfam02991, Atg8, Autophagy protein Atg8 ubiquitin like 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 6.061e-14
Putative Complete
sp_v3.0_unigene21753 SustainPine v3.0 1400
• AutoFact: U-box domain containing protein 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 8.042e-10
Putative N-terminus
sp_v3.0_unigene21828 SustainPine v3.0 701
• AutoFact: Coronatine-insensitive 1 n=1 Tax=Hevea brasiliensis RepID=A8HSC8_HEVBR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 3.107e-14
Putative N-terminus
sp_v3.0_unigene22010 SustainPine v3.0 786
• AutoFact: F-box protein PP2-A15 [Arabidopsis thaliana] sp|Q9LF92.1|P2A15_ARATH RecName: Full=F-box protein PP2-A15; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE A15; Short=AtPP2-A15 emb|CAB86904.1| putative protein [Arabidopsis thaliana] gb|AEE79024.1| F-box protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 5.958e-18
N-terminus
sp_v3.0_unigene22256 SustainPine v3.0 301
• AutoFact: Gaba(A) receptor-associated protein n=6 Tax=rosids RepID=E5GC57_CUCME 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 1.869e-13
N-terminus
sp_v3.0_unigene22293 SustainPine v3.0 4162
• AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative HECT ubiquitin-protein ligase 3 1.502e-08
Complete
sp_v3.0_unigene22356 SustainPine v3.0 688
• AutoFact: Autophagy protein 8 n=1 Tax=Acanthamoeba castellanii RepID=B5M496_ACACA 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 9.398e-14
Complete
sp_v3.0_unigene22671 SustainPine v3.0 737
• AutoFact: Os06g0140800 protein n=3 Tax=Oryza sativa RepID=Q0DEQ5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 9.787e-19
C-terminus
sp_v3.0_unigene22823 SustainPine v3.0 689
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 2.0e-12
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene23347 SustainPine v3.0 1680
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 3.096e-07
Complete
sp_v3.0_unigene23445 SustainPine v3.0 522
• AutoFact: Ubiquitin-conjugating enzyme E2-16 kDa n=48 Tax=Fungi/Metazoa group RepID=UBC1_MAGO7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene23545 SustainPine v3.0 1845
• AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: STIP1 homology and U box-containing protein 1 8.801e-09
Complete
sp_v3.0_unigene23589 SustainPine v3.0 808
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 1.873e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain