Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7167 SustainPine v3.0 2429
• AutoFact: pfam04564, U-box, U-box domain 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7196 SustainPine v3.0 3207
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Sma3: TIR1-like protein 9.369e-20
Complete
sp_v3.0_unigene7232 SustainPine v3.0 2756
• AutoFact: F-box family protein n=4 Tax=fabids RepID=B9H7S3_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoric diester hydrolase, putative 7.078e-19
Complete
sp_v3.0_unigene7392 SustainPine v3.0 1218
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9R8N3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 1.534e-09
N-terminus
sp_v3.0_unigene7411 SustainPine v3.0 2763
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.099e-07
Putative Complete
sp_v3.0_unigene7459 SustainPine v3.0 2724
• AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HECT 3.922e-09
Complete
sp_v3.0_unigene7486 SustainPine v3.0 3630
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin-protein ligase BRE1-like 2 2.373e-08
Complete
sp_v3.0_unigene7560 SustainPine v3.0 1027
• AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-conjugating enzyme-like 2.163e-15
Complete
sp_v3.0_unigene7826 SustainPine v3.0 1990
• AutoFact: Unassigned protein
• FL-Next: sp=F-box protein FBW2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin-protein ligase 3.466e-07
Complete
sp_v3.0_unigene7887 SustainPine v3.0 2289
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Sma3: TIR1-like protein 9.664e-20
Putative Complete
sp_v3.0_unigene7900 SustainPine v3.0 2531
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene7937 SustainPine v3.0 837
• AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 3.017e-07
Putative N-terminus
sp_v3.0_unigene7950 SustainPine v3.0 1112
• AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene8014 SustainPine v3.0 1646
• AutoFact: E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gb|AAM13201.1| unkn 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene8072 SustainPine v3.0 2908
• AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: IBR domain containing protein, expressed 8.941e-08
C-terminus
sp_v3.0_unigene8195 SustainPine v3.0 1815
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAB40988.1| putative protein [Arabidopsis thaliana] emb|CAB78313.1| putative protein [Arabidopsis thaliana] dbj|BAF00854.1| hypothetical protein [Arabidopsis thaliana] gb|ABH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 1.273e-07
Complete
sp_v3.0_unigene8206 SustainPine v3.0 2534
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein ariadne-1, putative 1.068e-10
Complete
sp_v3.0_unigene8395 SustainPine v3.0 1169
• AutoFact: E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] ref|NP_001030850.1| E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] sp|Q9SCQ2.1|UPL7_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL7; Short=Ubiquitin-protein ligase 7 emb|CAB64212.1| put 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase 2.704e-09
Putative Complete
sp_v3.0_unigene8477 SustainPine v3.0 1691
• AutoFact: U-box domain-containing protein 25 [Arabidopsis thaliana] sp|Q9LT79.1|PUB25_ARATH RecName: Full=U-box domain-containing protein 25; AltName: Full=Plant U-box protein 25 dbj|BAB02462.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63504.1| unknown 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 1.683e-15
Complete
sp_v3.0_unigene8526 SustainPine v3.0 1542
• AutoFact: U-box domain-containing protein 25 [Arabidopsis thaliana] sp|Q9LT79.1|PUB25_ARATH RecName: Full=U-box domain-containing protein 25; AltName: Full=Plant U-box protein 25 dbj|BAB02462.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63504.1| unknown 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain