Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene208025 SustainPine v3.0 245
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-16
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene209448 SustainPine v3.0 944
AutoFact: F-box protein 7 [Arabidopsis thaliana] sp|Q9XI00.1|SKI32_ARATH RecName: Full=F-box protein 7; AltName: Full=SKP1-interacting partner 32 gb|AAD41431.1|AC007727_20 Contains PF|00646 F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and gb|T88189 come from 0.0
FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene209857 SustainPine v3.0 527
AutoFact: nuclear protein localization protein 4-like protein [Arabidopsis thaliana] sp|Q9LYC2.1|NPL41_ARATH RecName: Full=NPL4-like protein 1 emb|CAB87745.1| putative protein [Arabidopsis thaliana] gb|AAK59569.1| unknown protein [Arabidopsis thaliana] gb|AAL07248. 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NPL4 family protein 1.019e-09
C-terminus
sp_v3.0_unigene210222 SustainPine v3.0 569
AutoFact: NPL4-like protein 2 [Arabidopsis thaliana] sp|O82264.1|NPL42_ARATH RecName: Full=NPL4-like protein 2 gb|AAC63651.1| expressed protein [Arabidopsis thaliana] gb|AAM15128.1| expressed protein [Arabidopsis thaliana] gb|ABG89130.1| NPL4b [synthetic construct] 0.0
FL-Next: Isoform 2 of NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 0.0
Sma3: NPL4 family protein 1.248e-09
Putative N-terminus
sp_v3.0_unigene210235 SustainPine v3.0 363
AutoFact: RING-H2 finger protein ATL2 n=2 Tax=Arabidopsis RepID=ATL2_ARATH 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain