Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mismatch repair

Term: GO:0006298  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene183999 SustainPine v3.0 379
AutoFact: Mismatch repair protein n=1 Tax=Solanum lycopersicum RepID=D6QY20_SOLLC 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Sma3: DNA mismatch repair protein MSH2 4.49e-09
Internal
sp_v3.0_unigene190239 SustainPine v3.0 517
AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-mRNA cleavage factor im, 25kD subunit, putative 3.279e-09
Complete
sp_v3.0_unigene192121 SustainPine v3.0 458
AutoFact: PREDICTED: similar to GL19160 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A5B0C 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.31e-13
Putative Complete
sp_v3.0_unigene193089 SustainPine v3.0 403
AutoFact: GI12236 n=1 Tax=Drosophila mojavensis RepID=B4L131_DROMO 9.0e-26
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene201549 SustainPine v3.0 256
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 7.939e-13
C-terminus
sp_v3.0_unigene208766 SustainPine v3.0 338
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain