Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mismatch repair

Term: GO:0006298  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24284 SustainPine v3.0 3444
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein MSH2 7.997e-09
Complete
sp_v3.0_unigene25456 SustainPine v3.0 843
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene34533 SustainPine v3.0 392
AutoFact: AAA-ATPase-like protein n=9 Tax=Poaceae RepID=Q8LKV4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Suppressor of K+ transport growth defect-like protein 5.85e-07
Internal
sp_v3.0_unigene42369 SustainPine v3.0 901
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene44245 SustainPine v3.0 809
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene45294 SustainPine v3.0 128
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA mismatch repair and recombination 4.361e-09
Internal
sp_v3.0_unigene46313 SustainPine v3.0 718
AutoFact: putative DNA mismatch repair protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein MSH3 2.44e-08
Internal
sp_v3.0_unigene46928 SustainPine v3.0 183
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q84LK0_ARATH 3.0e-14
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 2.577e-11
Internal
sp_v3.0_unigene48089 SustainPine v3.0 377
AutoFact: putative DNA mismatch repair protein [Arabidopsis thaliana] 5.0e-40
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50962 SustainPine v3.0 449
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 2.0e-15
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene51695 SustainPine v3.0 1284
AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-mRNA cleavage factor im, 25kD subunit, putative 2.737e-08
C-terminus
sp_v3.0_unigene51885 SustainPine v3.0 417
AutoFact: MutS-like protein 5 [Arabidopsis thaliana] 6.0e-36
FL-Next: sp=DNA mismatch repair protein MSH5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52567 SustainPine v3.0 375
AutoFact: DNA mismatch repair protein [Shewanella putrefaciens CN-32] gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32] 9.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene53403 SustainPine v3.0 240
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiamin pyrophosphokinase, putative 8.35e-09
Internal
sp_v3.0_unigene53828 SustainPine v3.0 471
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 1.451e-07
Internal
sp_v3.0_unigene53836 SustainPine v3.0 402
AutoFact: DNA mismatch repair protein -like [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene57416 SustainPine v3.0 487
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 1.0e-33
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene58955 SustainPine v3.0 186
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 3.0e-10
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene59542 SustainPine v3.0 266
AutoFact: DNA mismatch repair protein Msh6-1 n=3 Tax=Arabidopsis RepID=MSH6_ARATH 2.0e-32
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62281 SustainPine v3.0 250
AutoFact: MutS_V domain containing protein 1.0e-18
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 1.767e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain