Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene116201 SustainPine v3.0 452
AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 6.452e-38
Internal
sp_v3.0_unigene116215 SustainPine v3.0 493
AutoFact: Cellulose synthase n=1 Tax=Medicago truncatula RepID=Q2HT12_MEDTR 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene116532 SustainPine v3.0 256
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 5.0e-29
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene116735 SustainPine v3.0 234
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene117440 SustainPine v3.0 614
AutoFact: Cellulose synthase-like protein D4 n=2 Tax=Arabidopsis RepID=CSLD4_ARATH 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene119696 SustainPine v3.0 354
AutoFact: R2R3-Myb4 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPT6_PINPS 2.0e-29
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 2.883e-26
Internal
sp_v3.0_unigene120005 SustainPine v3.0 330
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TINY-like protein 4.763e-19
Internal
sp_v3.0_unigene120173 SustainPine v3.0 289
AutoFact: Cellulose synthase 8, glycosyltransferase family 2 n=4 Tax=Physcomitrella patens RepID=E1CA14_PHYPA 4.0e-21
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 3.883e-25
Internal
sp_v3.0_unigene120627 SustainPine v3.0 455
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene121896 SustainPine v3.0 410
AutoFact: transcription factor Myb [Capsicum annuum] 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB8; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 7.317e-26
Putative N-terminus
sp_v3.0_unigene122592 SustainPine v3.0 345
AutoFact: cellulose synthase [Populus tremuloides] 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene125929 SustainPine v3.0 288
AutoFact: cellulose synthase-like protein D4 [Populus tremuloides] 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 1.463e-37
Internal
sp_v3.0_unigene126253 SustainPine v3.0 915
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 1.704e-28
Putative N-terminus
sp_v3.0_unigene126878 SustainPine v3.0 758
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene127054 SustainPine v3.0 200
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 7.0e-34
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene127259 SustainPine v3.0 887
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene129846 SustainPine v3.0 602
AutoFact: Cellulose synthase 6 n=5 Tax=rosids RepID=Q2IB38_EUCGR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene129928 SustainPine v3.0 256
AutoFact: No apical meristem (NAM) protein [Medicago truncatula] 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene130746 SustainPine v3.0 507
AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 1.4013e-45
Internal
sp_v3.0_unigene130968 SustainPine v3.0 243
AutoFact: cellulose synthase 4 [Eucalyptus grandis] 3.0e-37
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain