Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99083 SustainPine v3.0 287
• AutoFact: Cellulose synthase A catalytic subunit 3 [UDP-forming] n=4 Tax=Brassicaceae RepID=CESA3_ARATH 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene99604 SustainPine v3.0 1183
• AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene99868 SustainPine v3.0 859
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene100128 SustainPine v3.0 638
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 4.5374e-42
C-terminus
sp_v3.0_unigene100290 SustainPine v3.0 396
• AutoFact: NAC domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SVG2_RICCO 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 1.485e-36
N-terminus
sp_v3.0_unigene100294 SustainPine v3.0 585
• AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 4.217e-34
Internal
sp_v3.0_unigene100720 SustainPine v3.0 651
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene102075 SustainPine v3.0 823
• AutoFact: cellulose synthase-like protein D4 [Populus tremuloides] 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 1.34525e-43
Internal
sp_v3.0_unigene102598 SustainPine v3.0 1307
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene103081 SustainPine v3.0 684
• AutoFact: laccase [Pinus taeda] 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene104661 SustainPine v3.0 412
• AutoFact: Ch-cobra n=1 Tax=Cunninghamia lanceolata RepID=B7S746_CUNLA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein COBRA, putative 2.671e-17
Internal
sp_v3.0_unigene104676 SustainPine v3.0 407
• AutoFact: Protein COBRA, putative n=1 Tax=Ricinus communis RepID=B9RLL0_RICCO 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein COBRA, putative 2.707e-17
Putative N-terminus
sp_v3.0_unigene105284 SustainPine v3.0 354
• AutoFact: Myb-like DNA-binding domain containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q10KS8_ORYSJ 3.0e-11
• FL-Next: tr=R2R3-MYB transcription factor MYB2; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.282e-08
Internal
sp_v3.0_unigene105803 SustainPine v3.0 559
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SNL1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene108998 SustainPine v3.0 472
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 7.204e-24
Internal
sp_v3.0_unigene111221 SustainPine v3.0 289
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 1.014e-13
Internal
sp_v3.0_unigene111886 SustainPine v3.0 681
• AutoFact: laccase 6 [Arabidopsis thaliana] sp|Q9ZPY2.1|LAC6_ARATH RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Diphenol oxidase 6; AltName: Full=Urishiol oxidase 6; Flags: Precursor gb|AAD20177.1| putative laccase (diphe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene112940 SustainPine v3.0 608
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene112972 SustainPine v3.0 344
• AutoFact: laccase 6 [Arabidopsis thaliana] sp|Q9ZPY2.1|LAC6_ARATH RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Diphenol oxidase 6; AltName: Full=Urishiol oxidase 6; Flags: Precursor gb|AAD20177.1| putative laccase (diphe 1.99965e-42
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
Internal
sp_v3.0_unigene114534 SustainPine v3.0 342
• AutoFact: R2R3-MYB transcription factor n=1 Tax=Pinus taeda RepID=Q6V0J3_PINTA 6.0e-20
• FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
• Sma3: Myb-related protein Hv33 1.353e-13
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain