Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene78371 SustainPine v3.0 324
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene78491 SustainPine v3.0 142
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 1.0e-18
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 1.049e-31
Internal
sp_v3.0_unigene79388 SustainPine v3.0 435
AutoFact: R2R3-MYB transcription factor MYB12 n=2 Tax=Picea RepID=A5JYF6_PICGL 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB12; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 7.31e-28
Internal
sp_v3.0_unigene80035 SustainPine v3.0 236
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-31
FL-Next: sp=Laccase-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene80459 SustainPine v3.0 188
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PL76_POPTR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene80651 SustainPine v3.0 213
AutoFact: Cellulose synthase 5, glycosyltransferase family 2 n=3 Tax=Physcomitrella patens RepID=A9RUW7_PHYPA 5.0e-14
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 9.105e-29
Internal
sp_v3.0_unigene80674 SustainPine v3.0 97
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 1.0e-10
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 8.269e-14
Putative C-terminus
sp_v3.0_unigene80857 SustainPine v3.0 268
AutoFact: AP2 domain class transcription factor n=2 Tax=Malus x domestica RepID=D5L132_MALDO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.819e-38
Internal
sp_v3.0_unigene81117 SustainPine v3.0 108
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene81194 SustainPine v3.0 185
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-23
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 7.186e-41
Internal
sp_v3.0_unigene81224 SustainPine v3.0 339
AutoFact: R2R3-MYB transcription factor MYB4 n=1 Tax=Picea glauca RepID=A5JYE8_PICGL 6.0e-35
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 6.522e-28
N-terminus
sp_v3.0_unigene93609 SustainPine v3.0 1469
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene94594 SustainPine v3.0 755
AutoFact: Cellulose synthase-like D3, glycosyltransferase family 2 protein n=4 Tax=Physcomitrella patens RepID=A9SS17_PHYPA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene96594 SustainPine v3.0 465
AutoFact: Brittle stalk-2-like protein 6 n=1 Tax=Zea mays RepID=A1DZD7_MAIZE 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COBRA-like protein 4 2.036e-15
N-terminus
sp_v3.0_unigene97224 SustainPine v3.0 721
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.271e-24
C-terminus
sp_v3.0_unigene97411 SustainPine v3.0 2261
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene97627 SustainPine v3.0 1455
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene97901 SustainPine v3.0 778
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 1.4013e-44
C-terminus
sp_v3.0_unigene98348 SustainPine v3.0 461
AutoFact: R2R3-MYB transcription factor n=1 Tax=Pinus taeda RepID=Q6V0J3_PINTA 9.80909e-45
FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
Sma3: MYB transcription factor 1.019e-33
Internal
sp_v3.0_unigene99027 SustainPine v3.0 334
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 1.0e-31
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 1.431e-30
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain